[graph] This pipeline performs DTI tensor model fitting and tractography.
It is based on UCL Camino.
It depends on the anatomical and the DTI pre-processing pipelines.
Steps:
- DTI fit.
- ROIxROI atlas-based deterministic tractography.
- Connectivity matrices:
- one with the number of tracts for each pair of ROIs, and
- the other with average tract FA values for each pair.
normalize_atlas: True
atlas_file: ''
# Camino Tractography
track.curvethresh: 50
track.anisthresh: 0.2