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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head>
<title>EuGène : Organisms</title>
<link rel="SHORTCUT ICON" href="Images/eg.jpg">
<link rel="STYLESHEET" type="text/css" href="Style/eugene.css">
<script language="JavaScript1.2" src="Javascripts/slide.js">
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</head>
<body leftmargin="0" topmargin="0" marginwidth="0" marginheight="0"
bgcolor="white">
<script language="JavaScript1.2" src="Javascripts/euG_menu.js">
</script>
<!-- Bug netscape 4
<div id="divNewsCont">
<div id="divNews">
</div>
</div>
-->
<table height="100%" width="100%" CELLSPACING="0" CELLPADDING="0"
border="0" rows="2">
<tr height="140">
<td BACKGROUND="Images/top.jpg" colspan="2" height="140"
valign="top"> </td>
</tr>
<tr>
<td width="145" valign="top" align="left"
BACKGROUND="Images/left.jpg">
<img src="Images/left.jpg" width="145" height="10"></td>
<td width="100%" valign=top>
<!-- DEBUT PAGE... -->
<table CELLSPACING="0" CELLPADDING="6" border="0">
<tr>
<td width="1%"></td>
<td width="49%"></td>
<td width="49%"></td>
<td width="1%"></td>
</tr>
<tr>
<td colspan="4"> <img src="Images/m_orga_on.jpg">
<br> <br> </td>
</tr>
<tr>
<td><img src="Images/puce.jpg" width="15"></td>
<td colspan="3" width="100%">
<font color="#06768c"> <b>Arabidopsis Thaliana :</b>
</font>
</td>
</tr>
<tr>
<td colspan="4" align="justify">
<i>Arabidopsis thaliana</i> is the first eukaryotic
organism where EuGène has been extensively used.
<br> <br>
The following tables compares the results obtained
with EuGene and several gene prediction programs
(described in Table 1).
</td>
</tr>
<tr>
<td colspan="4" align="center">
<table width="100%" cellpadding=0 cellspacing=0>
<tr><td>
<img height="1" width="100%"
src="Images/spacer.jpg">
</td></tr>
</table>
</td>
</tr>
<tr>
<td colspan="2" align="center" valign="center">
<table width="100%" cellpadding="1" cellspacing="1">
<tr>
<td>
<table width="100%" cellpadding="2" cellspacing=1>
<tr align="center" class="fonce">
<td> <font color="white" size="-1">
<b>Program</b></font></td>
<td> <font color="white" size="-1">
<b>Reference</b></font></td>
<td> <font color="white" size="-1">
<b>Version</b></font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>Grail</b></font></td>
<td align="center">
<font size="-1">Xu and Uberbacher, 1997
</font></td>
<td>
<font size="-1">1.3, data from [*]
</font></td>
</tr>
<tr class="A1">
<td><font size="-1"><b>Fex</b></font></td>
<td align="center">
<font size="-1">Solovyev et al., 1994
</font></td>
<td>
<font size="-1">data from [*]
</font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>MZEF</b></font></td>
<td align="center">
<font size="-1">Zhang, 1998
</font></td>
<td>
<font size="-1">prior p=0.04, data from [*]
</font></td>
</tr>
<tr class="A1">
<td><font size="-1"><b>GenScan</b>
</font></td>
<td align="center">
<font size="-1">Burge and Karlin, 1997
</font></td>
<td>
<font size="-1">data from [*]
</font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>GlimmerA</b>
</font></td>
<td align="center">
<font size="-1">Salzberg et al., 1999
</font></td>
<td>
<font size="-1">1.0
</font></td>
</tr>
<tr class="A1">
<td><font size="-1"><b>GMhmm1</b>
</font></td>
<td align="center">
<font size="-1">Lukashin and Borodovsky,
1998</font></td>
<td>
<font size="-1">data from [*]
</font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>GMhmm</b>
</font></td>
<td align="center">
<font size="-1">Lukashin and Borodovsky,
1998</font></td>
<td>
<font size="-1">2.2a
</font></td>
</tr>
<tr class="A1">
<td><font size="-1"><b>FgenesP</b>
</font></td>
<td align="center">
<font size="-1">Solovyev, unpublished,
1997</font></td>
<td>
<font size="-1">data from [*]
</font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>FgenesH</b>
</font></td>
<td align="center">
<font size="-1">Salamov and Solovyev,
unpublished, 1999</font></td>
<td>
<font size="-1">1.0
</font></td>
</tr>
<tr class="A1">
<td><font size="-1"><b>EuGène50</b>
</font></td>
<td align="center">
<font size="-1">-</font></td>
<td>
<font size="-1">Rel. 1.2, 50% sensitivity
</font></td>
</tr>
<tr class="A0">
<td><font size="-1"><b>EuGène80</b>
</font></td>
<td align="center">
<font size="-1">-</font></td>
<td>
<font size="-1">Rel. 1.2, 80% sensitivity
</font></td>
</tr>
</table>
</td>
</tr>
</table>
</td>
<td valign="center" align="justify" colspan="2">
<font size="-1">
Table 1 : A list of the gene prediction programs
compared along with the corresponding bibliographic
reference and version.<br> <br> <br>
[*] : N. Pavy, S. Rombauts, P. Déhais, C. Mathé,
D.V.V. Ramana, P. Leroy, and P. Rouzé. Evaluation of
gene prediction software using a genomic data set :
application to arabidopsis thaliana
sequences. Bioinformatics, 1999, 15(11):887-99.
</font>
</td>
</tr>
<tr>
<td colspan="4" align="center">
<table width="100%" cellpadding=0 cellspacing=0>
<tr><td>
<img height="1" width="100%"
src="Images/spacer.jpg">
</td></tr>
</table>
</td>
</tr>
<tr>
<td colspan="2" align="center" valign="top">
<table width="100%" cellpadding="1" cellspacing="1">
<tr>
<td>
<table width="100%" cellpadding="2" cellspacing=1>
<tr align="center" class="fonce">
<td> <font color="white" size="-1">
</font> </td>
<td colspan="3">
<font color="white" size="-1">
<b>Base level</b> </font> </td>
<td colspan="9">
<font color="white" size="-1">
<b>Exon level</b> </font> </td>
</tr>
<tr align="center" class="fonce">
<td> <font color="white" size="-1">
<b>Program</b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sn</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sp</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b>CC</b> </font> </td>
<td> <font color="white" size="-1">
<b>Pred</b> </font> </td>
<td> <font color="white" size="-1">
<b>Corr</b> </font> </td>
<td> <font color="white" size="-1">
<b>Olap</b> </font> </td>
<td> <font color="white" size="-1">
<b>Wrong</b> </font> </td>
<td> <font color="white" size="-1">
<b>Miss</b> </font> </td>
<td> <font color="white" size="-1">
<b>Split</b> </font> </td>
<td> <font color="white" size="-1">
<b>Merged</b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sn</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sp</i> </b> </font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>Grail</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">1184</font> </td>
<td align="center">
<font size="-1">449</font> </td>
<td align="center">
<font size="-1">506</font> </td>
<td align="center">
<font size="-1">229</font> </td>
<td align="center">
<font size="-1">80</font> </td>
<td align="center">
<font size="-1">12</font> </td>
<td align="center">
<font size="-1">16</font> </td>
<td align="center">
<font size="-1">44%</font> </td>
<td align="center">
<font size="-1">38%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>Fex</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">1745</font> </td>
<td align="center">
<font size="-1">562</font> </td>
<td align="center">
<font size="-1">484</font> </td>
<td align="center">
<font size="-1">699</font> </td>
<td align="center">
<font size="-1">155</font> </td>
<td align="center">
<font size="-1">180</font> </td>
<td align="center">
<font size="-1">23</font> </td>
<td align="center">
<font size="-1">55%</font> </td>
<td align="center">
<font size="-1">32%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>MZEF</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">846</font> </td>
<td align="center">
<font size="-1">459</font> </td>
<td align="center">
<font size="-1">236</font> </td>
<td align="center">
<font size="-1">151</font> </td>
<td align="center">
<font size="-1">358</font> </td>
<td align="center">
<font size="-1">32</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">45%</font> </td>
<td align="center">
<font size="-1">54%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>GenScan</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">938</font> </td>
<td align="center">
<font size="-1">652</font> </td>
<td align="center">
<font size="-1">204</font> </td>
<td align="center">
<font size="-1">82</font> </td>
<td align="center">
<font size="-1">175</font> </td>
<td align="center">
<font size="-1">10</font> </td>
<td align="center">
<font size="-1">16</font> </td>
<td align="center">
<font size="-1">63%</font> </td>
<td align="center">
<font size="-1">70%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>FgenesP</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">737</font> </td>
<td align="center">
<font size="-1">433</font> </td>
<td align="center">
<font size="-1">195</font> </td>
<td align="center">
<font size="-1">109</font> </td>
<td align="center">
<font size="-1">403</font> </td>
<td align="center">
<font size="-1">7</font> </td>
<td align="center">
<font size="-1">8</font> </td>
<td align="center">
<font size="-1">42%</font> </td>
<td align="center">
<font size="-1">59%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>GMhmm1</b> </font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">-</font> </td>
<td align="center">
<font size="-1">1104</font> </td>
<td align="center">
<font size="-1">845</font> </td>
<td align="center">
<font size="-1">172</font> </td>
<td align="center">
<font size="-1">87</font> </td>
<td align="center">
<font size="-1">26</font> </td>
<td align="center">
<font size="-1">10</font> </td>
<td align="center">
<font size="-1">4</font> </td>
<td align="center">
<font size="-1">82%</font> </td>
<td align="center">
<font size="-1">77%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>GMhmm</b> </font> </td>
<td align="center">
<font size="-1">0.97</font> </td>
<td align="center">
<font size="-1">0.93</font> </td>
<td align="center">
<font size="-1">0.94</font> </td>
<td align="center">
<font size="-1">1093</font> </td>
<td align="center">
<font size="-1">854</font> </td>
<td align="center">
<font size="-1">157</font> </td>
<td align="center">
<font size="-1">85</font> </td>
<td align="center">
<font size="-1">28</font> </td>
<td align="center">
<font size="-1">6</font> </td>
<td align="center">
<font size="-1">6</font> </td>
<td align="center">
<font size="-1">83%</font> </td>
<td align="center">
<font size="-1">78%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>GlimmerA</b> </font> </td>
<td align="center">
<font size="-1">0.87</font> </td>
<td align="center">
<font size="-1">0.89</font> </td>
<td align="center">
<font size="-1">0.84</font> </td>
<td align="center">
<font size="-1">1034</font> </td>
<td align="center">
<font size="-1">697</font> </td>
<td align="center">
<font size="-1">186</font> </td>
<td align="center">
<font size="-1">164</font> </td>
<td align="center">
<font size="-1">149</font> </td>
<td align="center">
<font size="-1">5</font> </td>
<td align="center">
<font size="-1">26</font> </td>
<td align="center">
<font size="-1">67%</font> </td>
<td align="center">
<font size="-1">67%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>FgenesH</b> </font> </td>
<td align="center">
<font size="-1">0.98</font> </td>
<td align="center">
<font size="-1">0.93</font> </td>
<td align="center">
<font size="-1">0.94</font> </td>
<td align="center">
<font size="-1">1070</font> </td>
<td align="center">
<font size="-1">900</font> </td>
<td align="center">
<font size="-1">105</font> </td>
<td align="center">
<font size="-1">72</font> </td>
<td align="center">
<font size="-1">23</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">88%</font> </td>
<td align="center">
<font size="-1">84%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>FgenesHGC</b> </font> </td>
<td align="center">
<font size="-1">0.98</font> </td>
<td align="center">
<font size="-1">0.93</font> </td>
<td align="center">
<font size="-1">0.94</font> </td>
<td align="center">
<font size="-1">1021</font> </td>
<td align="center">
<font size="-1">902</font> </td>
<td align="center">
<font size="-1">100</font> </td>
<td align="center">
<font size="-1">78</font> </td>
<td align="center">
<font size="-1">25</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">12</font> </td>
<td align="center">
<font size="-1">88%</font> </td>
<td align="center">
<font size="-1">88%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>EuGène50</b> </font> </td>
<td align="center">
<font size="-1">0.95</font> </td>
<td align="center">
<font size="-1">0.95</font> </td>
<td align="center">
<font size="-1">0.93</font> </td>
<td align="center">
<font size="-1">974</font> </td>
<td align="center">
<font size="-1">849</font> </td>
<td align="center">
<font size="-1">94</font> </td>
<td align="center">
<font size="-1">38</font> </td>
<td align="center">
<font size="-1">86</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">83%</font> </td>
<td align="center">
<font size="-1">87%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>EuGène80</b> </font> </td>
<td align="center">
<font size="-1">0.95</font> </td>
<td align="center">
<font size="-1">0.95</font> </td>
<td align="center">
<font size="-1">0.93</font> </td>
<td align="center">
<font size="-1">991</font> </td>
<td align="center">
<font size="-1">862</font> </td>
<td align="center">
<font size="-1">89</font> </td>
<td align="center">
<font size="-1">47</font> </td>
<td align="center">
<font size="-1">71</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">84%</font> </td>
<td align="center">
<font size="-1">87%</font> </td>
</tr>
</table>
</td>
</tr>
</table>
</td>
<td colspan="2" align="center" valign="top">
<table width="100%" cellpadding="1" cellspacing="1">
<tr>
<td>
<table width="100%" cellpadding="2" cellspacing=1>
<tr align="center" class="fonce">
<td> <font color="white" size="-1">
<b>Program</b> </font> </td>
<td> <font color="white" size="-1">
<b>Pred</b> </font> </td>
<td> <font color="white" size="-1">
<b>Corr</b> </font> </td>
<td> <font color="white" size="-1">
<b>Miss</b> </font> </td>
<td> <font color="white" size="-1">
<b>Part</b> </font> </td>
<td> <font color="white" size="-1">
<b>Wrong</b> </font> </td>
<td> <font color="white" size="-1">
<b>Split</b> </font> </td>
<td> <font color="white" size="-1">
<b>Merged</b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sn</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sp</i> </b> </font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>GenScan</b> </font> </td>
<td align="center">
<font size="-1">150</font> </td>
<td align="center">
<font size="-1">28</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">139</font> </td>
<td align="center">
<font size="-1">13</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">60</font> </td>
<td align="center">
<font size="-1">17%</font> </td>
<td align="center">
<font size="-1">19%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>FgenesP</b> </font> </td>
<td align="center">
<font size="-1">92</font> </td>
<td align="center">
<font size="-1">10</font> </td>
<td align="center">
<font size="-1">47</font> </td>
<td align="center">
<font size="-1">111</font> </td>
<td align="center">
<font size="-1">3</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">60</font> </td>
<td align="center">
<font size="-1">6%</font> </td>
<td align="center">
<font size="-1">11%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>GMhmm1</b> </font> </td>
<td align="center">
<font size="-1">208</font> </td>
<td align="center">
<font size="-1">67</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">100</font> </td>
<td align="center">
<font size="-1">27</font> </td>
<td align="center">
<font size="-1">18</font> </td>
<td align="center">
<font size="-1">12</font> </td>
<td align="center">
<font size="-1">40%</font> </td>
<td align="center">
<font size="-1">32%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>GMhmm</b> </font> </td>
<td align="center">
<font size="-1">187</font> </td>
<td align="center">
<font size="-1">69</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">98</font> </td>
<td align="center">
<font size="-1">24</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">12</font> </td>
<td align="center">
<font size="-1">41%</font> </td>
<td align="center">
<font size="-1">37%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>GlimmerA</b> </font> </td>
<td align="center">
<font size="-1">265</font> </td>
<td align="center">
<font size="-1">50</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">116</font> </td>
<td align="center">
<font size="-1">58</font> </td>
<td align="center">
<font size="-1">35</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">30%</font> </td>
<td align="center">
<font size="-1">19%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>FgenesH</b> </font> </td>
<td align="center">
<font size="-1">176</font> </td>
<td align="center">
<font size="-1">94</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">73</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">10</font> </td>
<td align="center">
<font size="-1">56%</font> </td>
<td align="center">
<font size="-1">53%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>FgenesHGC</b> </font> </td>
<td align="center">
<font size="-1">175</font> </td>
<td align="center">
<font size="-1">96</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">71</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">12</font> </td>
<td align="center">
<font size="-1">57%</font> </td>
<td align="center">
<font size="-1">55%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>EuGène50</b> </font> </td>
<td align="center">
<font size="-1">178</font> </td>
<td align="center">
<font size="-1">101</font> </td>
<td align="center">
<font size="-1">5</font> </td>
<td align="center">
<font size="-1">62</font> </td>
<td align="center">
<font size="-1">15</font> </td>
<td align="center">
<font size="-1">1</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">60%</font> </td>
<td align="center">
<font size="-1">57%</font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>EuGène80</b> </font> </td>
<td align="center">
<font size="-1">199</font> </td>
<td align="center">
<font size="-1">112</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">54</font> </td>
<td align="center">
<font size="-1">22</font> </td>
<td align="center">
<font size="-1">11</font> </td>
<td align="center">
<font size="-1">0</font> </td>
<td align="center">
<font size="-1">67%</font> </td>
<td align="center">
<font size="-1">56%</font> </td>
</tr>
</table>
</td>
</tr>
</table>
</td>
</tr>
<tr>
<td valign="top" align="justify" colspan="2">
<font size="-1">
Table 2 : Results of the gene prediction software
evaluation on Araset at the base and exon level. Each
line corresponds to a gene prediction program, as
described in Table 1. At the base level, on the left,
sensitivity (<i>Sn</i>), specificity (<i>Sp</i>) as well
correlation coefficient (CC) are reported. At the exon
level, each column successively gives the number of
predicted (pred), correct (corr), overlapping with an
annotated exon in the same coding frame (olap),
overpredicted (wrong), missing (miss) exons. The two
next columns give the number of annotated exons which
are predicted as two split exons (split) and the number
of predicted exons which actually merge annotated exons
into one exon. The two last columns report sensitivity
(<i>Sn</i>) and specificity (<i>Sp</i>) at the exon
level.
</font>
</td>
<td valign="top" align="justify" colspan="2">
<font size="-1">
Table 3 : Results of the gene prediction software
evaluation on Araset at the whole gene level. Each line
corresponds to a gene prediction program, as described
in Table 1. The number of predicted (pred), completely
correct (corr), completely missing (miss), partially
predicted (part) and overpredicted (wrong) genes are
first presented. The two next columns give the number of
annotated genes that are actually split in the
predictions and the number of predicted genes which
actually merge annotated genes into one gene. The two
last columns report sensitivity (<i>Sn</i>) and
specificity (<i>Sp</i>) at the gene level.
</font>
</td>
</tr>
<tr>
<td colspan="4" align="center">
<table width="100%" cellpadding=0 cellspacing=0>
<tr><td>
<img height="1" width="100%"
src="Images/spacer.jpg">
</td></tr>
</table>
</td>
</tr>
<tr>
<td colspan="4" align="center" valign="top">
<table width="100%" cellpadding="1" cellspacing="1">
<tr>
<td>
<table width="100%" cellpadding="2" cellspacing=1>
<tr align="center" class="fonce">
<td> </td>
<td colspan="3">
<font color="white" size="-1">
<b>Base level</b> </font> </td>
<td colspan="9">
<font color="white" size="-1">
<b>Exon level</b> </font> </td>
</tr>
<tr align="center" class="fonce">
<td> <font color="white" size="-1">
<b>Version</b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sn</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sp</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b>CC</b> </font> </td>
<td> <font color="white" size="-1">
<b>Pred</b> </font> </td>
<td> <font color="white" size="-1">
<b>Corr</b> </font> </td>
<td> <font color="white" size="-1">
<b>Olap</b> </font> </td>
<td> <font color="white" size="-1">
<b>Wrong</b> </font> </td>
<td> <font color="white" size="-1">
<b>Miss</b> </font> </td>
<td> <font color="white" size="-1">
<b>Split</b> </font> </td>
<td> <font color="white" size="-1">
<b>Merged</b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sn</i> </b> </font> </td>
<td> <font color="white" size="-1">
<b> <i>Sp</i> </b> </font> </td>
</tr>
<tr class="A0">
<td> <font size="-1">
<b>EuGène50</b> </font> </td>
<td align="center">
<font size="-1">0.948</font> </td>
<td align="center">
<font size="-1">0.952</font> </td>
<td align="center">
<font size="-1">0.934</font> </td>
<td align="center">
<font size="-1">974</font> </td>
<td align="center">
<font size="-1">849</font> </td>
<td align="center">
<font size="-1">94</font> </td>
<td align="center">
<font size="-1">38</font> </td>
<td align="center">
<font size="-1">86</font> </td>
<td align="center">
<font size="-1">2</font> </td>
<td align="center">
<font size="-1">14</font> </td>
<td align="center">
<font size="-1">82.67%</font> </td>
<td align="center">
<font size="-1">87.17%</font> </td>
</tr>
<tr class="A1">
<td> <font size="-1">
<b>EuGène50EST</b> </font> </td>
<td align="center">
<font size="-1">0.961</font> </td>
<td align="center">
<font size="-1">0.952</font> </td>
<td align="center">
<font size="-1">0.942</font> </td>
<td align="center">