diff --git a/README.Phreeqc.TXT b/README.Phreeqc.TXT index 131dae21d..910bd0d71 100644 --- a/README.Phreeqc.TXT +++ b/README.Phreeqc.TXT @@ -221,7 +221,7 @@ D.4. Compile and install PHREEQC Phreeqc_2_1999_manual.pdf Manual for PHREEQC version 2 phreeqc.txt Short explanation for PHREEQC phreeqc3.chm Latest PHREEQC documentation - wrir02-4172.pdf Documenation of isotope calculations + wrir02-4172.pdf Documentation of isotope calculations Install\examples files: Input files for the 22 examples described in the version 3 manual @@ -332,7 +332,7 @@ E.8. Install the program. install/share/doc/phreeqc Phreeqc_3_2013_manual.pdf Manual for Phreeqc version 3 Phreeqc_2_1999_manual.pdf Manual for Phreeqc version 2 - wrir02-4172.pdf Documenation of isotope calculations + wrir02-4172.pdf Documentation of isotope calculations phreeqc.txt Short explanation for Phreeqc RELEASE Release notes README this readme file diff --git a/RELEASE.TXT b/RELEASE.TXT index 902b52a63..626f9c6e3 100644 --- a/RELEASE.TXT +++ b/RELEASE.TXT @@ -334,7 +334,7 @@ Anthophyllite -12.4 5.70E-04 52 0.4 -13.7 5.00E-06 48 Added Basic function f_visc("H+") that returns the fractional contribution of a species to viscosity of the solution when parameters are defined for the species with -viscosity. Actually, it gives the contribution of the species to the B and D terms in the Jones-Dole - eqution, assuming that the A term is small. The fractional contribution can be negative, for + equation, assuming that the A term is small. The fractional contribution can be negative, for example f_visc("K+") is usually less than zero. Bug-fix: When -Vm parameters of SOLUTION_SPECIES were read after -viscosity parameters, the @@ -599,7 +599,7 @@ Anthophyllite -12.4 5.70E-04 52 0.4 -13.7 5.00E-06 48 The YAML capability would be especially useful if a GUI (Graphical User Interface) is used to set up model initial conditions. The GUI could write a YAML file that contains directives for PhreeqcRM methods that need to be run and - the corresonding data needed to initialize a PhreeqcRM instance--for example, + the corresponding data needed to initialize a PhreeqcRM instance--for example, setting units; running a PHREEQC input file to define initial and boundary conditions; distribution of initial conditions to the model cells; setting initial porosity, saturation, temperature, and pressure. @@ -674,7 +674,7 @@ Anthophyllite -12.4 5.70E-04 52 0.4 -13.7 5.00E-06 48 identified by name. int GetVarNbytes(std::string name) - Returns the total number of bytes neded to store the value or vector + Returns the total number of bytes needed to store the value or vector of values identified by name. std::string GetVarType(std::string name) @@ -1110,7 +1110,7 @@ USER_PUNCH 2 related to the decay of the surface potential with distance from the surface. Theory says that the potential at distance d from the surface is equal to psi0*exp(d/DL), where psi0 is the surface potential and DL is - the Debye length. The lengh is inversely related to ionic strength. + the Debye length. The length is inversely related to ionic strength. Example: 10 DL = DEBYE_LENGTH @@ -1181,7 +1181,7 @@ Version 3.6.2: January 28, 2020 ---------------- January 28, 2020 ---------------- - PhreeqcRM: Documenation for Fortran RM_RunString had incorrect order for instances. + PhreeqcRM: Documentation for Fortran RM_RunString had incorrect order for instances. The order is workers, initial_phreeqc, utilities. ---------------- @@ -1862,7 +1862,7 @@ Version 3.4.0: November 9, 2017 (svn 12927) H+ = H+ -dw 9.31e-9 763 0.46 1e-10 - where the first number is the diffusion coeficient at 25 C, and the second number is a damping + where the first number is the diffusion coefficient at 25 C, and the second number is a damping factor for the temperature correction, as proposed by Smolyakov, according to Anderko and Lencka, 1997, Ind. Chem. Eng. Res. 36, 1932-1943: @@ -2465,7 +2465,7 @@ Version 3.2.2: August 24, 2015 svn 9998 -------- Pitzer.dat was adjusted to fit CO2 pressure and density by changing - Vm, analytical expression, and adding a CO2-CO2 iteraction parameter. + Vm, analytical expression, and adding a CO2-CO2 interaction parameter. -------- svn 9995 @@ -2517,7 +2517,7 @@ Version 3.2.1: July 7, 2015 -------- svn 9930 -------- - PhreeqcRM had a serious error in the convertion of units from transport + PhreeqcRM had a serious error in the conversion of units from transport to themodule. The error occurred when using H2O as a component and mg/L as the transport unit. @@ -2721,7 +2721,7 @@ Version 3.1.5: December 18, 2014 -------- svn 9000 -------- - Kinetic names were not saved correctly to allow unique retrival by name. + Kinetic names were not saved correctly to allow unique retrieval by name. The error could have lead to misidentification of kinetic reactions for a cell. @@ -2840,7 +2840,7 @@ Version 3.1.2: March 1, 2014 svn 8520 -------- - Changes in MCD to accomodate unequal cell lengths. + Changes in MCD to accommodate unequal cell lengths. -------- svn 8502 @@ -2949,7 +2949,7 @@ Version 3.1.1: December 6, 2013 automatic -reset false. A file may be defined for each SELECTED_OUTPUT n that will - recieve the output from the data block. Using i to + receive the output from the data block. Using i to represent a specific integer, USER_PUNCH i will write to the file defined for SELECTED_OUTPUT i. If USER_PUNCH i is defined, but SELECTED_OUTPUT i is not, then no data will @@ -2967,7 +2967,7 @@ Version 3.1.1: December 6, 2013 If SELECTED_OUTPUT i has been defined, a new data block of SELECTED_OUTPUT i will retain the previous definition if only -active and (or) -user_punch are defined. Defining - any other identifier will cause the old definiton + any other identifier will cause the old definition to be removed and its file closed; the data for SELECTED_OUTPUT i will be defined entirely by the new data block. @@ -3121,7 +3121,7 @@ Version 3.1.1: December 6, 2013 svn 7829 -------- - Added Basic fuction EQUIV_FRAC that returns the + Added Basic function EQUIV_FRAC that returns the equivalent fraction of a surface or exchange species. The three arguments are (1) Species name (input), @@ -3133,7 +3133,7 @@ Version 3.1.1: December 6, 2013 10 f = EQUIV_FRAC("AlX3", eq, x$) - f = equivlalent fraction of AlX3 relative to + f = equivalent fraction of AlX3 relative to total equivalents of X sites. eq = 3.0 x$ = "X" @@ -3154,7 +3154,7 @@ Version 3.1.1: December 6, 2013 svn 7828 -------- - Added Basic fuction SPECIES_FORMULA that returns the + Added Basic function SPECIES_FORMULA that returns the stoichiometry of an aqueous, exchange, or surface species. The function returns a string: "aq" for aqueous, "ex" for exchange, "surf" for surface, @@ -3477,7 +3477,7 @@ Version 2.18.0: April 9, 2011 This automatic adjustment is suggested rather than explicit definition of the initial guesses through SOLUTION_MODIFY; -activities. However, the -activities - identifier may be used and will supercede the automatic + identifier may be used and will supersede the automatic adjustment. The adjustment of the initial guesses for activities @@ -3717,7 +3717,7 @@ Version 2.18.0: April 9, 2011 The example below is indented to indicate which information is necessary to change a data item. - Working back through the indention levels for + Working back through the indentation levels for and item, each heading of a lower order is necessary to define the data item. In the example below, to change the number of moles of barite from @@ -4183,7 +4183,7 @@ Version 2.18.0: April 9, 2011 -------- svn 4830 -------- - Changed default for exchange species activty + Changed default for exchange species activity coefficients to be equal to the Pitzer aqueous activity coefficients when using Pitzer aqueous model. Default is @@ -4467,7 +4467,7 @@ Version 2.17.0: February 25, 2010 phi(i,inf) = a + bt +ct^2 beta(i) = d + et + ft^2 - where a, b, c, d, e, and f are empirical constants and t in Celcius. + where a, b, c, d, e, and f are empirical constants and t in Celsius. Data input of the constants are in the keyword data block SOLUTION_SPECIES using the new identifier -millero. @@ -4585,7 +4585,7 @@ Version 2.15.0: February 5, 2008 svn 2680 -------- - Identifiers for paramaters controlling the integration by + Identifiers for parameters controlling the integration by CVODE have been added in the KINETICS data block. -bad_step_max bad_steps @@ -5202,7 +5202,7 @@ Version 2.9: ------------------------------------------------------------ * Added new keyword COPY that allows a data entity to be copied from one index to a new index - or to a range of indicies. Format is + or to a range of indices. Format is COPY keyword index index_start[-index_end] @@ -5241,7 +5241,7 @@ Version 2.9: 10 t = SYS("As") the function will return the total arsenic in the system. - (2) 5 argumens + (2) 5 arguments 10 t = SYS("As", count_species, names$, types$, moles) @@ -5667,7 +5667,7 @@ Version 2.18.0: April 9, 2011 -------- svn 5212 -------- - Subscript error in solver (ineq) when reseting deltas + Subscript error in solver (ineq) when resetting deltas after optimization failed. -------- @@ -5817,7 +5817,7 @@ Version 2.17.0: February 25, 2010 -------- svn 4115 -------- - Fixed bugs with unititialized strings in Basic, which + Fixed bugs with uninitialized strings in Basic, which caused an error in renumbering with PhreeqcI. Tested most Basic functions. Fixed bugs with LG and GAMMA functions, which did not return the correct values @@ -5833,7 +5833,7 @@ Version 2.17.0: February 25, 2010 SIT and Pitzer, each species has an unknown, so the number of unknowns is large for a system with many elements. Now set the maximum iterations to be - equal to the number of unknows plus the number of + equal to the number of unknowns plus the number of equations/inequalities. -------- @@ -6193,7 +6193,7 @@ Version 2.13.1: January 16, 2007 svn 1368: (1) Added multicomponent diffusion in transport and SOLUTION_SPECIES. (2) Added BASIC functions to obtain and - modify the porosity in a cell. (3) Aded mobile surface and Donnan + modify the porosity in a cell. (3) Added mobile surface and Donnan option in SURFACE. (4) Added special BASIC function to change the diffusion coefficient of a SURFACE, and hence to change the status from mobile to immobile or immobile to @@ -6295,7 +6295,7 @@ SURFACE_SPECIES Plane 2 (or d) is 0. - svn 1030: Fixed bug in tranport. Mixing was not printed + svn 1030: Fixed bug in transport. Mixing was not printed when using -cvode in kinetics. svn 984: Fixed bug in transport when cell without a @@ -6558,7 +6558,7 @@ Version 2.9 Date: Wed September 15, 2004 Added new keyword COPY that allows a data entity to be copied from one index to a new index - or to a range of indicies. Format is + or to a range of indices. Format is COPY keyword index index_start[-index_end] @@ -6603,7 +6603,7 @@ Version 2.9 Date: Wed September 15, 2004 10 t = SYS("As") the function will return the total arsenic in the system. - (2) 5 argumens + (2) 5 arguments 10 t = SYS("As", count_species, names$, types$, moles)