Releases: CamDavidsonPilon/lifelines
Releases · CamDavidsonPilon/lifelines
Lifelines 0.4.4
- Lots of improvements to numerical stability (but something things still need work)
- Additions to
summary
in CoxPHFitter. - Make all prediction methods output a DataFrame
- Fixes bug in 1-d input not returning in CoxPHFitter
- Lots of new tests.
0.4.3
- refactoring of
qth_survival_times
: it can now accept an iterable (or a scalar still) of probabilities in the q argument, and will return a DataFrame with these as columns. If len(q)==1 and a single survival function is given, will return a scalar, not a DataFrame. Also some good speed improvements. - KaplanMeierFitter and NelsonAalenFitter now have a
_label
property that is passed in during the fit. - KaplanMeierFitter/NelsonAalenFitter's inital
alpha
value is overwritten if a newalpha
value is passed
in during thefit
. - New method for KaplanMeierFitter:
conditional_time_to
. This returns a DataFrame of the estimate:
med(S(t | T>s)) - s, human readable: the estimated time left of living, given an individual is aged s. - Adds option
include_likelihood
to CoxPHFitter fit method to save the final log-likelihood value.
Lifelines 0.4.2
0.4.2
- Massive speed improvements to CoxPHFitter.
- Additional prediction method:
predict_percentile
is available on CoxPHFitter and AalenAdditiveFitter. Given a percentile, p, this function returns the value t such that S(t | x) = p. It is a generalization ofpredict_median
. - Additional kwargs in
k_fold_cross_validation
that will accept different prediction methods (default ispredict_median
). - Bug fix in CoxPHFitter
predict_expectation
function. - Correct spelling mistake in newton-rhapson algorithm.
datasets
now contains functions for generating the respective datasets, ex:generate_waltons_dataset
.- Bumping up the number of samples in statistical tests to prevent them from failing so often (this a stop-gap)
- pep8 everything
Version 0.4.1
CoxFitter
is now known asCoxPHFitter
- refactoring some tests that used redundant data from
lifelines.datasets
. - Adding cross validation: in
utils
is a newk_fold_cross_validation
for model selection in regression problems. - Change CoxPHFitter's fit method's
display_output
toFalse
. - fixing bug in CoxPHFitter's
_compute_baseline_hazard
that errored when sending Series objects to
survival_table_from_events
. - CoxPHFitter's
fit
now looks to columns with too low variance, and halts NR algorithm if a NaN is found. - Adding a Changelog.
- more sanitizing for the statistical tests =)