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How to make phylogenetic using binary data #237

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sekhwal opened this issue Sep 1, 2022 · 0 comments

sekhwal commented Sep 1, 2022

I am trying to make phylogenetic tree using binary data. I tried using iqtree -s MGE_binary.txt. Please suggest.

Example Input file:
C1 C3 C5 D1
gene1 1 0 1 0
gene2 0 1 0 1
gene2 1 0 0 1
geen3 1 1 0 1

It seems, IQTREE requires PHYLIP format of binary data. For example:

4 6
S1 010101
S2 110011
S3 0--100
S4 10--10

Could you please suggest, how to prepare PHYLIP format of binary data to run IQTREE.

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