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Simple way of getting a list of file paths #211

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seallard opened this issue Aug 21, 2024 · 4 comments
Open

Simple way of getting a list of file paths #211

seallard opened this issue Aug 21, 2024 · 4 comments

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@seallard
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seallard commented Aug 21, 2024

Production sometimes needs to do some manual work with the files in a bundle, They would like a way of getting a raw list for all remote/non remote files without the table formatting done by housekeeper. Currently, production needs to resort to grep magic to get this raw list of file paths.

  • Is there currently a workaround for this issue? If so, what is it?
    • Yes, one can either look into the housekeeper directory on hasta, but that would mean that we would have to think about versions. One can also use the API directly, but that seems unsafe in the long run.
  • How much time would be saved by implementing this feature every week?
    • Hard to estimate, not too often
  • How many users are affected by this issue?
    • Some members of production bioinfo
  • Are customers affected by this issue?
    • No
@seallard seallard changed the title List raw file paths Simple way of getting a list of the raw remote file paths Aug 21, 2024
@Vince-janv
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@Clinical-Genomics/prodbioinfo Could you please fill out the questions below and get back to us? (or close if no longer relevant)

Answer the following questions:

  • Is there currently a workaround for this issue? If so, what is it?

  • How much time would be saved by implementing this feature on a weekly basis?

  • How many users are affected by this issue?

  • Are customers affected by this issue?

@karlnyr
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karlnyr commented Oct 10, 2024

We need to save this, but it does seem like a neat feature, we will refine this next week!

@karlnyr
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karlnyr commented Oct 10, 2024

(not sure if this belongs in Trailblazer though)

@karlnyr karlnyr transferred this issue from Clinical-Genomics/trailblazer Oct 17, 2024
@karlnyr karlnyr changed the title Simple way of getting a list of the raw remote file paths Simple way of getting a list of file paths Oct 17, 2024
@diitaz93
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Clarification of acceptance criteria

  • Have a way of having all files (remote and non-remote) in a HK bundle

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