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iRODS data storage integration #23

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wpbonelli opened this issue Jan 23, 2021 · 3 comments
Open

iRODS data storage integration #23

wpbonelli opened this issue Jan 23, 2021 · 3 comments
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enhancement New feature or request in progress Someone is working on this issue priority

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@wpbonelli
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We should support direct iRODS access (via https://github.com/irods/python-irodsclient) as before. Probably easiest to expose nested commands (e.g., plantit terrain pull, plantit irods push, plantit s3 pull).

@wpbonelli wpbonelli added the enhancement New feature or request label Jan 23, 2021
@wpbonelli
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Need to make sure of compatibility with the scanner R pi OS since iCommands don't work, and we still need a more performant upload solution

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wpbonelli commented Sep 16, 2021

For iRODS we should support both keyword auth and environment file in the default location (~/.irods/irods_environment.json). Also need to support tickets (Computational-Plant-Science/plantit#225) as per the docs here

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Mostly implemented as of 1be38a3, pending resolution of ticket questions here

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