Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

question about definition in # contigs column in ouput produced in Chdb.tsv file #399

Open
alicia-hgim opened this issue Jun 27, 2024 · 0 comments

Comments

@alicia-hgim
Copy link

Hi, I am wondering about the meaning of the column '# contigs' in the produced file Chdb.tsv. I dont understand the definition in the wiki.
I am entering in CheckM a fasta file containing 188 contigs. But then, after running checkM, in the Chdb.tsv file, the colum '# contigs' is equal to 2676. Shouldnt be the same number as the original one? Or is checkM calculating again the number of contigs of the original fasta?

Thanks in advance.

# for free to join this conversation on GitHub. Already have an account? # to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant