Sysimage compilaiton failed

[lucasmsoares96]

when having to compile a custom sysimage with the command

using PackageCompiler; create_sysimage(["Flux"]; sysimage_path="JuliaSysimage.so")

i get the following error

⡆ [00m:22s] PackageCompiler: compiling incremental system imageinvalid redefinition of constant StaticArraysExt
Stacktrace:
 [1] top-level scope
   @ none:1
⠙ [00m:23s] PackageCompiler: compiling incremental system imageModule, e::Any)
   @ Core ./boot.jl:370
 [3] top-level scope
   @ /tmp/jl_jOtUnWPGVC:152
 [4] eval(m::Module, e::Any)
   @ Core ./boot.jl:370
 [5] top-level scope
   @ /tmp/jl_jOtUnWPGVC:147
in expression starting at /tmp/jl_jOtUnWPGVC:147
✖ [00m:23s] PackageCompiler: compiling incremental system image
ERROR: failed process: Process(setenv(`/home/lucas/.julia/juliaup/julia-1.9.0-rc2+0.x64.linux.gnu/bin/julia --color=yes --startup-file=no --pkgimages=no --sysimage=/home/lucas/.julia/juliaup/julia-1.9.0-rc2+0.x64.linux.gnu/lib/julia/sys.so --project=/home/lucas/.julia/environments/v1.9 --output-o=/tmp/jl_ZyRsPGrc3e.o /tmp/jl_jOtUnWPGVC`,["LSCOLORS=Gxfxcxdxbxegedabagacad", "PATH=/home/lucas/.juliaup/bin:/home/lucas/.go/bin:/home/lucas/.go/current/bin:/home/lucas/.cargo/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/lucas/.local/share/coursier/bin:/home/lucas/.cabal/bin:/home/lucas/.ghcup/bin", "DBUS_STARTER_BUS_TYPE=session", "WAYLAND_DISPLAY=wayland-0", "QT_ACCESSIBILITY=1", "INVOCATION_ID=5949b9662f6a43998a78143ffee1d897", "DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/1000/bus,guid=7f3d1bb2c5e01f10165a5a396447624d", "XDG_CURRENT_DESKTOP=GNOME", "LANG=pt_BR.UTF-8", "SHLVL=1"  …  "SESSION_MANAGER=local/debian:@/tmp/.ICE-unix/1948,unix/debian:/tmp/.ICE-unix/1948", "XMODIFIERS=@im=ibus", "SSH_AGENT_LAUNCHER=openssh", "JULIA_CPU_TARGET=native", "HOME=/home/lucas", "TERM=xterm-256color", "LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=00:su=37;41:sg=30;43:ca=00:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.zst=01;31:*.tzst=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.wim=01;31:*.swm=01;31:*.dwm=01;31:*.esd=01;31:*.avif=01;35:*.jpg=01;35:*.jpeg=01;35:*.mjpg=01;35:*.mjpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.webp=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.m4a=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.oga=00;36:*.opus=00;36:*.spx=00;36:*.xspf=00;36:*~=00;90:*#=00;90:*.bak=00;90:*.old=00;90:*.orig=00;90:*.part=00;90:*.rej=00;90:*.swp=00;90:*.tmp=00;90:*.dpkg-dist=00;90:*.dpkg-old=00;90:*.ucf-dist=00;90:*.ucf-new=00;90:*.ucf-old=00;90:*.rpmnew=00;90:*.rpmorig=00;90:*.rpmsave=00;90:", "COLORTERM=truecolor", "OPENBLAS_MAIN_FREE=1", "VTE_VERSION=7003"]), ProcessExited(1)) [1]

Stacktrace:
  [1] pipeline_error
    @ ./process.jl:565 [inlined]
  [2] run(::Cmd; wait::Bool)
    @ Base ./process.jl:480
  [3] run(::Cmd)
    @ Base ./process.jl:477
  [4] (::PackageCompiler.var"#20#22")()
    @ PackageCompiler ~/.julia/packages/PackageCompiler/i90pX/ext/TerminalSpinners.jl:157
  [5] spin(f::PackageCompiler.var"#20#22", s::PackageCompiler.TerminalSpinners.Spinner{Base.TTY})
    @ PackageCompiler.TerminalSpinners ~/.julia/packages/PackageCompiler/i90pX/ext/TerminalSpinners.jl:164
  [6] macro expansion
    @ ~/.julia/packages/PackageCompiler/i90pX/ext/TerminalSpinners.jl:157 [inlined]
  [7] create_sysimg_object_file(object_file::String, packages::Vector{String}, packages_sysimg::Set{Base.PkgId}; project::String, base_sysimage::String, precompile_execution_file::Vector{String}, precompile_statements_file::Vector{String}, cpu_target::String, script::Nothing, sysimage_build_args::Cmd, extra_precompiles::String, incremental::Bool)
    @ PackageCompiler ~/.julia/packages/PackageCompiler/i90pX/src/PackageCompiler.jl:128
  [8] create_sysimg_object_file
    @ ~/.julia/packages/PackageCompiler/i90pX/src/PackageCompiler.jl:301 [inlined]
  [9] create_sysimage(packages::Vector{String}; sysimage_path::String, project::String, precompile_execution_file::Vector{String}, precompile_statements_file::Vector{String}, incremental::Bool, filter_stdlibs::Bool, cpu_target::String, script::Nothing, sysimage_build_args::Cmd, include_transitive_dependencies::Bool, base_sysimage::Nothing, julia_init_c_file::Nothing, version::Nothing, soname::Nothing, compat_level::String, extra_precompiles::String)
    @ PackageCompiler ~/.julia/packages/PackageCompiler/i90pX/src/PackageCompiler.jl:578
 [10] top-level scope
    @ REPL[4]:1

Flux Version

 [587475ba] Flux v0.13.15

julia> versioninfo()

Julia Version 1.9.0-rc2
Commit 72aec423c2a (2023-04-01 10:41 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 8 × Intel(R) Core(TM) i7-4870HQ CPU @ 2.50GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-14.0.6 (ORCJIT, haswell)
  Threads: 4 on 8 virtual cores
Environment:
  JULIA_NUM_THREADS = 4

[ToucheSir]

To my knowledge, neither Flux nor any of its dependencies we control defines a package extension for StaticArrays. You'll want to find out which transitive dependencies do and re-post this question in a more general Julia help forum.

[mcabbott]

ForwardDiff has such an extension, but not under this name:

https://github.com/JuliaDiff/ForwardDiff.jl/blob/release-0.10/ext/ForwardDiffStaticArraysExt.jl

This points to Accessors, which Flux somehow indirectly depends on:

https://juliahub.com/ui/Search?q=StaticArraysExt&type=symbols

https://juliahub.com/ui/Packages/Flux/QdkVy/0.13.15?page=1

Edit: also on discourse, https://discourse.julialang.org/t/sysimage-compilaiton-failed-with-flux/97914

[CarloLucibello]

Fixed in ComponenteArrays.jl