Additional algorithm 52 (out of context).html

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<!-- #  John Wiley & Sons, Inc.                                                                                                   # -->
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<!-- #  Book:   Algorithms in Bioinformatics: Theory and Implementation                                                           # -->
<!-- #  Author: Dr. Paul A. Gagniuc                                                                                               # -->
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<!-- #  Institution:                                                                                                              # -->
<!-- #    University Politehnica of Bucharest                                                                                     # -->
<!-- #    Faculty of Engineering in Foreign Languages                                                                             # -->
<!-- #    Department of Engineering in Foreign Languages                                                                          # -->
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<!-- #  Area:   European Union                                                                                                    # -->
<!-- #  Date:   04/01/2021                                                                                                        # -->
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<!-- #  Cite this work as:                                                                                                        # -->
<!-- #    Paul A. Gagniuc. Algorithms in Bioinformatics: Theory and Implementation. John Wiley & Sons, 2021, ISBN: 9781119697961. # -->
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<script>

// LOADING A KNOWN PWM
c = "|G -0.92   -0.22   0.69    1.39    -40.06  0.69    -0.92   1.16    -0.92" +
     "|A 0.18    0.47    -0.22   -40.06  -40.06  0.69    1.03    -0.92   -40.06" +
     "|T -0.22   0.18    -0.22   -40.06  1.39    -40.06  -40.06  -0.92   1.03" +
     "|C 0.47    -0.92   -0.92   -40.06  -40.06  -40.06  -0.22   -40.06  -0.22"

var n = [];
var m = [];
var p = [];

m = c.split('|');

// LOAD PWM
for(var i=1; i<m.length; i++) {

    p[i-1]=[];
    n = m[i].split('\t');

    for(var j=0; j<n.length; j++){
        p[i-1][j]=n[j]
    }
}

document.write(SMC(p));

</script>