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[Question] How does Manta handle PCR duplicates? #291

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tbaker18 opened this issue Aug 31, 2022 · 1 comment
Open

[Question] How does Manta handle PCR duplicates? #291

tbaker18 opened this issue Aug 31, 2022 · 1 comment

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@tbaker18
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Hello,

General question, does Manta require PCR duplicates to be removed or is having the PCR duplicates marked in the bam sufficient?

@esamorodnitsky
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I'd like to know that too!

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