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main.tex
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\documentclass[12pt]{report}
\usepackage{array,pdflscape}
\newcolumntype{R}{>{\raggedright\arraybackslash}p}
% Load required packages
\usepackage{etoolbox}
\apptocmd{\sloppy}{\hbadness 10000\relax}{}{}
\setcounter{tocdepth}{3}
\setcounter{secnumdepth}{3}
\usepackage{natbib}
\usepackage{graphicx}
\usepackage{float}
\usepackage{lscape}
\usepackage{hyperref}
\usepackage{ulem}
\graphicspath{ {images/} }
\renewcommand{\familydefault}{\sfdefault}
\usepackage[left=4cm,top=2cm,right=2cm,bottom=2cm]{geometry}
\usepackage{setspace}
\usepackage{multirow}
\usepackage{amsmath}
\usepackage{listings}
\usepackage{subcaption}
\usepackage{datetime}
\usepackage{titlesec}
\usepackage[parfill]{parskip}
\usepackage{glossaries}
\usepackage{verbatim}
\usepackage[usenames,dvipsnames]{color,colortbl}
\lstset{
language=R, % the language of the code
basicstyle=\tiny\ttfamily, % the size of the fonts that are used for the code
numbers=left, % where to put the line-numbers
numberstyle=\tiny\color{Blue}, % the style that is used for the line-numbers
stepnumber=1, % the step between two line-numbers. If it is 1, each line
% will be numbered
numbersep=5pt, % how far the line-numbers are from the code
backgroundcolor=\color{white}, % choose the background color. You must add \usepackage{color}
showspaces=false, % show spaces adding particular underscores
showstringspaces=false, % underline spaces within strings
showtabs=false, % show tabs within strings adding particular underscores
frame=single, % adds a frame around the code
rulecolor=\color{black}, % if not set, the frame-color may be changed on line-breaks % within not-black text (e.g. commens (green here))
tabsize=2, % sets default tabsize to 2 spaces
captionpos=b, % sets the caption-position to bottom
breaklines=true, % sets automatic line breaking
breakatwhitespace=false, % sets if automatic breaks should only happen at whitespace
keywordstyle=\color{RoyalBlue}, % keyword style
commentstyle=\color{YellowGreen}, % comment style
stringstyle=\color{ForestGreen} % string literal style
}
\lstloadlanguages{R}
\titleformat{\chapter}[display]
{\Huge\bfseries}
{}
{0pt}
{\thechapter.\ }
\titleformat{name=\chapter,numberless}[display]
{\Huge\bfseries}
{}
{0pt}
{}
\titlespacing*{\chapter}{0pt}{-30pt}{40pt}
\onehalfspacing
\large \title{Using a dynamic exposure model to improve understanding of exposure to urban air pollution}
\author{James D Smith, MSc, BA, PgCert, PgDip \vspace{2cm} \\
\multicolumn{1}{p{.7\textwidth}}{\centering Environmental Research Group, School of Analytical \& Environmental Sciences, Faculty of Life Sciences \& Medicine, King's College London}}
\date{Thesis submitted to King's College London in fulfillment of the requirements for the degree of Doctor of Philosophy \vspace{2cm} \\
December 2018}
\makeglossaries
%% Glossary items
\input{glossary/glossary}
\begin{document}
\maketitle
\chapter*{Abstract}
Epidemiological studies of the negative effects on health of poor air quality are typically based on subjects' residential address. These 'static' methods may be assigning exposure to subjects/populations incorrectly. Possible sources of error include the coarse spatial and temporal scale of the pollutant data, failing to account for lack of movement of the subjects, and not adequately modelling the effects of microenvironments. This PhD takes a large Transport for London (\gls{tfl}) survey (the '\gls{ltds}') of Londoners daily activities and uses geographical information science techniques to create a detailed model (the '\gls{ltdsx}') of Londoners typical movements including time of day, location and microenvironment. This model is then combined with the King’s version of the Community Multiscale Air Quality model (\gls{cmaq}-Urban), which is a multi-pollutant and multi-source high resolution spatial and temporal model of UK air quality. By combining the \gls{ltdsx} with \gls{cmaq}-Urban and then undertaking further micro-environmental modelling on top of this (in-car, in-train, indoors, the London Underground) detailed exposure estimates to PM$_{2.5}$ and NO$_{2}$ for the population of London are calculated and then compared to the 'static' exposure method. Results show that exposure indoors, and whether or not subjects use the London Underground (for PM$_{2.5}$ exposure), were important determinants of Londoners daily exposure. The PM$_{2.5}$ exposure modelling for when subjects were on the London Underground was therefore investigated further with a measurement campaign across the network, resulting in a spatial routing model of the network ('TubeAir'). As a stand-alone model this will be useful for future exposure studies in London, and it’s use was demonstrated on a sample journey. This research concludes by exploring the difficulty of evaluating hybrid exposure models in terms of the representativeness of any exposure calculated, by comparing measured concentrations on a repeated number of cycling journeys with modelled exposures on the same journey.
\\
\\
n.b. The LaTeX files for this thesis are available at : \url{https://github.com/JimShady/PhD}
\chapter*{Dedication}
For Aimee and Lola.
\chapter*{Acknowledgements}
I would like to express gratitude to my supervisors, Dr Benjamin Barratt and Dr Heather Walton. Their guidance, ideas and support have been crucial. I would also like to thank Professor Frank Kelly. who gave me the opportunity to start this part-time PhD program in the first place. In may 'day job', current and previous work colleagues in our group have helped me at various times, mainly Dr Sean Beevers, Dr Christina Mitsakou, Dr Nutthida Kitwiroon, Dr Andrew Beddows, Dr Gregor Stewart, Dr David Dajnak, Dr David Green, Dr Ian Mudway and Dr Gary Fuller. University aside, special thanks go to my family, friends and in particular my wife Aimee for putting up with my elevated stress levels for so long. Also to Frankie Manning, for giving me a way to express myself in a totally different way.
Finally, a little thank you to the various online communities that I have interacted with and sought advice from over the years, who were able to offer advice and suggestions when I ran into practical problems that nobody else could solve. I try to give back when I can.
\chapter*{Declaration}
I, James David Smith, declare that all the work submitted in this thesis is my own and that all references are cited accordingly.\\
\\
\\
Signed: \underline{\hspace{6cm}}
\\
\\
Date: \hspace{0.16cm} \underline{\hspace{6cm}}
\tableofcontents
\listoffigures
\listoftables
\glsnogroupskiptrue
\chapter{Introduction}
\input{chapters/1_introduction}
\label{chap:intro}
\chapter{Background}
\input{chapters/2_background}
\label{chap:background}
\input{chapters/2a_dynamic_exposure}
\label{chap:dynamic_exposure}
\chapter{Modelling Londoners movements}
\label{chap:the_ltdsx}
\input{chapters/5_reconstruction}
\chapter{Dynamic exposure modelling}
\label{chap:the_lhem}
\input{chapters/6_exposure_linkage}
\chapter{Exposure to \texorpdfstring{PM$_{2.5}$}{} on the London Underground}
\label{chap:monitoring_on_underground}
\input{chapters/7_london_underground}
\chapter{Evaluating dynamic exposure models}
\label{chap:evaluating_dynamic_exposure_models}
\input{chapters/8_evaluation}
\chapter{Discussion, conclusions \& future work}
\input{chapters/9_wrap_up}
\bibliographystyle{bibtex/elsarticle-harv.bst}
\bibliography{bibtex/PhD-KCL.bib}
\printglossary
\appendix
\chapter{Code Listings}
\input{chapters/12_code_listings}
\end{document}