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Input format #9

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amomin-pact opened this issue Apr 28, 2020 · 1 comment
Open

Input format #9

amomin-pact opened this issue Apr 28, 2020 · 1 comment

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@amomin-pact
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Hi Rohit,
I was trying to use the 'predict' method from mhcnuggets. Currently based on the user_guide notebook one can only provide the peptide sequence as a file. Is there an option to provide the peptide sequences as a list or any other python data structure.

Thanks
Amin
@richelbilderbeek
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Hi Amin,

AFAICS, MHCnuggets does not allow to do so. If you enjoy R, you may enjoy mhcnuggetsr, which does allow you to do so. Disclaimer: I am the author of that R package.

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@richelbilderbeek @amomin-pact