Comprehensive shape analysis of the cortex in Huntington’s disease

Comprehensive cortical shape analysis in Huntington's disease.

Submitted for publication in Human Brain Mapping.

Requirements:

SurfStat
Stats and ML toolbox (MATLAB)
Signal Processing toolbox (MATLAB)

Usage

Run the R pipeline (stat.R) to completion for each feature to obtain the chi-squared values.
Run the MATLAB pipeline (omni_stat.m) for each feature to correct and visualize the detected areas on the cortical surface.