experiment_ddi_baseline.hoc

// experiment_ddi_baseline.hoc
// Olfactory bulb network model: experiment file
//   for dendrodendritic inhibition.
// Andrew Davison, The Babraham Institute, 2000.

// *** Set inputs and connections
set_no_input()
glomshock(20,2,5)
randomise_NMDA(NMDAweight,(0.5*NMDAweight)^2)

// *** Voltage clamp mitral cell
mit[3][3].GABAA.e = 0 // mV
objref vclamp
mit[3][3].soma vclamp = new SEClamp(0.5)
vclamp.rs = 2 // Mohm
vclamp.dur1 = 1
vclamp.amp1 = -65
vclamp.dur2 = 4000
vclamp.amp2 = -70
vclamp.dur3 = 0
vclamp.amp3 = -65

// *** Set-up recording
objref igabaa, tvec, vgran, vmit, iclamp
record_step = 0.1
record_vec_size = int(tstop/record_step)+1
igabaa = new Vector(record_vec_size)
tvec = new Vector(record_vec_size)
vgran = new Vector(record_vec_size)
vmit = new Vector(record_vec_size)
iclamp = new Vector(record_vec_size)
record_step = 0.1
igabaa.record(&mit[3][3].GABAA.i,record_step)
tvec.record(&t,record_step)
vgran.record(&gran[0][6].periph.v(0.5),record_step)
vmit.record(&mit[0][0].dend.v(0.5),record_step)
iclamp.record(&vclamp.i,record_step)

// *** Process data and print out results
proc print_results() {
  xopen("calcisilag.hoc")
  print_raster(fileroot)
  print_gran_raster(fileroot)
  print_gran_hist(1,fileroot)
  sprint(filename,"%s.curvs",fileroot)
  outfile.wopen(filename)
  for i = 0, tvec.size()-1 {
    outfile.printf("%8.3g %8.3g %8.3g %8.3g %8.3g \n",tvec.x[i],igabaa.x[i],vmit.x[i],vgran.x[i],iclamp.x[i])
  }
  outfile.close()
  print "Results printed to files"
}

xopen("ddi_baseline.ses")