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README.md

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Contents

Jupyter notebooks for the SPECT exercises. Recommended order:

Week 1

  1. SPECT_acquisition_model shows how to use sirf.STIR with a SPECT projection matrix SPECTUB (suitable for parallel beam collimators).
  2. SPECT_OSEM shows how to use sirf.STIR to run a OSEM reconstruction from simulated data.

Week 2

  1. SPECT_OSEM_measured_data illustrates OSEM reconstruction with resolution modelling from a NEMA phantom