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Fisher geometric fitness model #2

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ThibaultLatrille opened this issue Jul 30, 2019 · 0 comments
Open

Fisher geometric fitness model #2

ThibaultLatrille opened this issue Jul 30, 2019 · 0 comments
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@ThibaultLatrille
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Adding SimuGeo model (on top of SimuDiv, SimuPoly, SimuFold)
For each site of the protein, the 20 amino-acid are N-dimensional vectors (the vectors can be different for each site, or shared across the sequence).
The phenotype is a N-dimensional vector given by the sum at each site of the encoded amino-acid.
The fitness is given the Gaussian distribution of this N-dimensional vector.

@ThibaultLatrille ThibaultLatrille added this to the release milestone Jul 30, 2019
@ThibaultLatrille ThibaultLatrille self-assigned this Jul 30, 2019
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