Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

A bug in tutorial #19

Open
HelloWorldLTY opened this issue Aug 18, 2023 · 0 comments
Open

A bug in tutorial #19

HelloWorldLTY opened this issue Aug 18, 2023 · 0 comments

Comments

@HelloWorldLTY
Copy link

Hi, I found that there is a bug existing in the velovi tutorial:

image

I think the input should not be a tutorial, so I check "ext_uncertainty_df",

and it is a tuple, but its 1st term is a dataframe.

image

So I think the code to generate uncertainty should be:

for c in ext_uncertainty_df[0].columns:
    adata.obs[c + "_extrinisic"] = np.log10(ext_uncertainty_df[0][c].values)

Based on this approach, I can generate the uncertainty plot.

image

Thanks a lot.

# for free to join this conversation on GitHub. Already have an account? # to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant