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PySEP v0.4.0#112

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bch0w merged 73 commits intomasteradjtomo/pysep:masterfrom develadjtomo/pysep:develCopy head branch name to clipboardJul 19, 2023

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Commits on Dec 8, 2022

• Fix various bugs and adds features to code (#60)

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• merging install update from master

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Commits on Jan 12, 2023

• added utility function to convert obspy catalog to event input list

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Commits on Jan 25, 2023

• Bugfix missing rotation metadata throwing TypeError (#63)

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• feature mass download (#64)

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Commits on Feb 10, 2023

• Remove llnl_db_client hard dependency (#65)

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Commits on Feb 11, 2023

• Feature: event declustering and source receiver weighting (#66)

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Commits on Feb 15, 2023

• clean up docstrings of pysep/recsec, bugfix pysep restrictions (#68)

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• bugfix: rotate parameter check function was setting rotate parameter as an empty list, but it was expected as NoneType within the main processing function. removed this type conversion

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Commits on Feb 16, 2023

• bugfix: log message failing when magnitude or depth set to NoneType

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• bugfix allow NoneType event magnitude and depth, ass

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• Update docs (#69)

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Commits on Feb 17, 2023

• fixed docstrings and corrected links for API references in docs

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• fixed up typos and cleaned up docs

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• Merge branch 'master' into devel

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• Merge branch 'master' into devel

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• Delete jekyll-gh-pages.yml

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• Bugfix: unable to set event_depth_km or event_magnitude as NoneType (#72)

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• Update pysep.py

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• Feature recsec tmarks (#73)

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Commits on Feb 18, 2023

• Bugfix: plotw rs sort (#76)

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• Update CHANGELOG.md

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• version bump v0.3.0

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• Merge branch 'devel' of github.com:adjtomo/pysep into devel

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Commits on Feb 23, 2023

• overwrite updated master files from v0.3.1

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• Bugfix trace merge (#81)

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Commits on Feb 24, 2023

• Feature: fill data gaps and bug fix trim start end times (#84)

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Commits on Feb 27, 2023

• bugfix: location code hardcoded for bulk waveform request

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• Bugfix: stations removed insufficient time (#88)

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• bugfix-xticks

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Commits on Feb 28, 2023

• Bugfix: plotw_rs sort order and multi-page order (#90)

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• typo fix: missing space in log message

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• bugfix bool check on fill value during trim was skipping over when fill was 0, even though that was a requested value

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Commits on Mar 1, 2023

• source reciver map plot plots event before stations to center on epicenter

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• fixed broken preprocessing test, minor break, still working as expected

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• improve source receiver map plotting (#91)

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• Update CHANGELOG.md

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Commits on Mar 2, 2023

• improve TauP theoretical arrival usage (#94)

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• related to #93, remove hard no-NoneType restriction on 'output_unit' and 'water_level' during pysep checks because 1. ObsPy allows NoneType water level and 2. there is already a check for valid out…

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• Update CHANGELOG.md

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Commits on Mar 6, 2023

• add readthedocs yaml file to shift docs to RTD, and bumped docs version number and trimmed down doc environment to bare essentials (holdovers from previous docs builds not required)

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• General updates and bugfixes (#97)

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Commits on Mar 8, 2023

• Bugfix: RecSec abs sorting and y-tick scaling (#100)

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• Update documentation (#102)

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• addresses #71 comment about maps not plotting when no depth or magnitude information provided. This was used in the title of the map, so added some if statements to avoid these quantities if they a…

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Commits on Mar 10, 2023

• General bugfixing and updates (#105)

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• overhaul file writing system plus general updates (#106)

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Commits on Mar 11, 2023

• bump version number for easier version tracking

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• bump version in toml and docs files

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• adjusting log behavior, allow turning off log with 'save_log' kwarg, and move created log to output directory after run has completed

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Commits on Mar 13, 2023

• #107 incorrect directory name for pysep doc page

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• #107 add overwrite catch for '-W' option

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Commits on Apr 10, 2023

• #109 allow log file creation to create the output directory if specified by the user but not already existing.

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• added a -v/--version option to pysep command line tool to check pysep version number

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Commits on Apr 11, 2023

• removing debugger statement

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• bugfix: multi-page record section was using the incorrect number of traces to traverse through the list causing index errors

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Commits on Apr 12, 2023

• bugfix: avoid silently skipping nonexistent pysep path or syn path in recsec initialization

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• bugfix: read_sem_cartesian was incorrectly defining azimuth based for two points in cartesian space

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• bugfix: implemented separate amplitude scaling arrays tfor data (st) and synthetics (st_syn) because originally all scaling was done w.r.t data array which would cause incorrect normalizations for …

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• fixing broken tests due to indexing errors

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• bump dev version number

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• bugfix typo

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• bugfix: read sem cartesian azimuth calculation takes sign of coordinate into account

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Commits on Apr 13, 2023

• bugfix: checking bool of max amplitudes for recsec syn check

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Commits on Apr 14, 2023

• feature: kwarg 'title' allows user to overwrite default recsec title

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Commits on May 18, 2023

• recsec docstring typo fix type -> param

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Commits on May 31, 2023

• bugfix: subsetting routine in source receiver map plot had the ability to ignore repeat stations even if they came from different networks, due to exclusion based on station name only. Now it exclu…

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Commits on Jun 2, 2023

• typo fix recsec docstring parameter: x_min -> x_max

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Commits on Jul 14, 2023

• add warning log message to alert User if Config file parameter is not explicitely used by PySEP to help debug argument mispelling or future API changes not registering. Related to #110

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Commits on Jul 19, 2023

• Merge branch 'master' into devel

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• bump version numbers to 0.4.0 throughout package, merge master

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• updates CHANGELOG.md since latest version bump

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• updates docs links to readthedocs, removes old gh-pages section for docs publishing in docs readme

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