From 6fe21ef94c0a56deb210bcb2d535d3c9844de58f Mon Sep 17 00:00:00 2001 From: anmol thapar Date: Thu, 19 Dec 2024 11:52:54 +0000 Subject: [PATCH] fix: update PopPUNK installation branch in CI workflow --- .github/workflows/pytest.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/pytest.yml b/.github/workflows/pytest.yml index d1d3f9e7..dd49f71b 100644 --- a/.github/workflows/pytest.yml +++ b/.github/workflows/pytest.yml @@ -89,8 +89,8 @@ jobs: sudo apt-get install -y '^libxcb.*-dev' libx11-xcb-dev libglu1-mesa-dev libxrender-dev libxi-dev libxkbcommon-dev libxkbcommon-x11-dev pip install joblib==1.1.0 conda install -c bioconda pp-sketchlib=2.0.0 - pip3 install git+https://github.com/bacpop/PopPUNK@vnetwork_relabelling#egg=PopPUNK -# TODO revert above branch + pip3 install git+https://github.com/bacpop/PopPUNK@network_relabelling#egg=PopPUNK +# TODO revert above branch before merge - name: Install Poetry uses: snok/install-poetry@v1 with: