environment.yml

name: facet-develop
channels:
  - conda-forge
  - bcg_gamma
dependencies:
  # run
  - boruta_py ~= 0.3
  - gamma-pytools ~= 1.2, >= 1.2.1
  - joblib ~= 1.1
  - lightgbm ~= 3.2
  - matplotlib ~= 3.3
  - numpy ~= 1.22
  - pandas ~= 1.4
  - python ~= 3.8
  - scikit-learn ~= 0.24.2
  - scipy ~= 1.6
  - shap ~= 0.39.0
  - sklearndf ~= 1.2
  # build/test
  - black = 20.8b1
  - conda-build ~= 3.21
  - conda-verify ~= 3.1
  - docutils ~= 0.16
  - flit ~= 3.0
  - isort ~= 5.5
  - jinja2 ~= 2.11
  - markupsafe < 2.1  # markupsafe 2.1 breaks support for jinja2
  - m2r ~= 0.2
  - pluggy ~= 0.13
  - pre-commit ~= 2.7
  - pydata-sphinx-theme ~= 0.4.0
  - pytest ~= 5.2
  - pytest-cov ~= 2.8
  - pyyaml ~= 5.1
  - sphinx ~= 3.4
  - sphinx-autodoc-typehints ~= 1.11
  - toml ~= 0.10
  - tox ~= 3.20
  - yaml ~= 0.2
  # notebooks
  - jupyterlab ~= 3.1
  - nbclassic ~= 0.2.8
  - nbsphinx ~= 0.7.1
  - openpyxl ~= 3.0
  - seaborn ~= 0.11
  - tableone ~= 0.7