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Does the input need to be .fastq.gz or .fastq ? #3

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bensutherland opened this issue May 11, 2018 · 0 comments
Open

Does the input need to be .fastq.gz or .fastq ? #3

bensutherland opened this issue May 11, 2018 · 0 comments
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When using ngsfilter or illuminapairedend, they require input as .fastq, but currently we are using .fastq.gz as the primer removal (cutadapt) input in the script.
Need to make this parallel.
@bensutherland bensutherland self-assigned this May 11, 2018
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