From adb0a5ec36bd4fdab975d00fba255a7ecf3505de Mon Sep 17 00:00:00 2001 From: Francesco Tabaro Date: Thu, 13 Jul 2023 17:17:19 +0200 Subject: [PATCH] fix: edit_condition_file rule --- workflow/include/salmonTE.smk | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflow/include/salmonTE.smk b/workflow/include/salmonTE.smk index 0ef5dd6..f32ad34 100644 --- a/workflow/include/salmonTE.smk +++ b/workflow/include/salmonTE.smk @@ -33,7 +33,7 @@ rule edit_condition_file: ) sample_sheet = sample_sheet.set_index("tmp") else: - sample_sheet = sample_sheet.set_index("filename_1") + sample_sheet = sample_sheet.set_index("name") sample_sheet = sample_sheet.reindex(index=salmon_condition_sheet.index)