CHANGELOG.txt

Changes
=======
0.5.2
-----
fix complement (@mruffalo)

0.5.0
-----
python 3 compatibility thanks to mruffalo

0.4.5
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pyfasta split can handle > 52 files. (thanks Devtulya)

0.4.4
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fix pyfasta extract

0.4.3
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Add 0 or 1-based intervals in sequence() thanks @jamescasbon

0.4.2
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update for latest numpy (can't close memmap)

0.4.1
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check for duplicate headers.

0.4.0
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* add key_fn kwarg to constuctor

0.3.9
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* only require 'r' (not r+) for memory map.

0.3.8
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* clean up logic for mixing inplace/non-inplace flattened files.
  if the inplace is available, it is always used. 

0.3.6/7
-------
* dont re-flatten the file every time!
* allow spaces before and after the header in the orginal fasta.

0.3.5
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* update docs in README.txt for new CLI stuff.
* allow flattening inplace.
* get rid of memmap (results in faster parsing).

0.3.4
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* restore python2.5 compatiblity.
* CLI: add ability to exclude sequence from extract
* CLI: allow spliting based on header.

0.3.3
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* include this file in the tar ball (thanks wen h.)

0.3.2
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* separate out backends into records.py

* use nosetests (python setup.py nosetests)

* add a TCRecord backend for next-gen sequencing availabe if tc is (easy-)installed.

* improve test coverage.