diff --git a/src/test/java/org/broadinstitute/hellbender/tools/walkers/vqsr/CNNScoreVariantsIntegrationTest.java b/src/test/java/org/broadinstitute/hellbender/tools/walkers/vqsr/CNNScoreVariantsIntegrationTest.java
index ea50ca6b4a0..9ed10874a40 100644
--- a/src/test/java/org/broadinstitute/hellbender/tools/walkers/vqsr/CNNScoreVariantsIntegrationTest.java
+++ b/src/test/java/org/broadinstitute/hellbender/tools/walkers/vqsr/CNNScoreVariantsIntegrationTest.java
@@ -7,6 +7,7 @@
 import org.broadinstitute.hellbender.testutils.VariantContextTestUtils;
 import org.broadinstitute.hellbender.utils.Utils;
 
+import org.broadinstitute.hellbender.utils.python.PythonScriptExecutorException;
 import org.testng.Assert;
 import org.testng.SkipException;
 import org.broadinstitute.hellbender.utils.variant.GATKVCFConstants;
@@ -65,6 +66,22 @@ public void testAllDefaultArgs() {
         assertInfoFieldsAreClose(tempVcf, expectedVcf, GATKVCFConstants.CNN_1D_KEY);
     }
 
+    @Test(groups = {"python"}, expectedExceptions = PythonScriptExecutorException.class)
+    public void testExceptionDuringAsyncBatch() {
+        final ArgumentsBuilder argsBuilder = new ArgumentsBuilder();
+        final File tempVcf = createTempFile("tester", ".vcf");
+        // the last variant in this vcf has a  value of "." for the float attributes in the default CNN
+        // annotation set MQ, MQRankSum, ReadPosRankSum, SOR, VQSLOD, and QD
+        //TODO: move this into the large resources dir
+        final File malformedVCF = new File("src/test/resources/cnn_1d_chr20_subset_expected.badAnnotations.vcf");
+        argsBuilder.add(StandardArgumentDefinitions.VARIANT_LONG_NAME, malformedVCF)
+                .add(StandardArgumentDefinitions.OUTPUT_LONG_NAME, tempVcf.getPath())
+                .add(StandardArgumentDefinitions.REFERENCE_LONG_NAME, b37_reference_20_21)
+                .add(StandardArgumentDefinitions.ADD_OUTPUT_VCF_COMMANDLINE, "false");
+
+        runCommandLine(argsBuilder);
+    }
+
     @Test(groups = {"python"})
     public void testInferenceArchitecture() {
         final boolean newExpectations = false;
diff --git a/src/test/resources/cnn_1d_chr20_subset_expected.badAnnotations.vcf b/src/test/resources/cnn_1d_chr20_subset_expected.badAnnotations.vcf
new file mode 100644
index 00000000000..d6316a98571
--- /dev/null
+++ b/src/test/resources/cnn_1d_chr20_subset_expected.badAnnotations.vcf
@@ -0,0 +1,601 @@
+##fileformat=VCFv4.2
+##FILTER=<ID=LowQual,Description="Low quality">
+##FILTER=<ID=VQSRTrancheINDEL99.00to99.90,Description="Truth sensitivity tranche level for INDEL model at VQS Lod: -2.3601 <= x < -0.1114">
+##FILTER=<ID=VQSRTrancheINDEL99.90to100.00+,Description="Truth sensitivity tranche level for INDEL model at VQS Lod < -86.6571">
+##FILTER=<ID=VQSRTrancheINDEL99.90to100.00,Description="Truth sensitivity tranche level for INDEL model at VQS Lod: -86.6571 <= x < -2.3601">
+##FILTER=<ID=VQSRTrancheSNP99.00to99.90,Description="Truth sensitivity tranche level for SNP model at VQS Lod: -4.1147 <= x < 0.1697">
+##FILTER=<ID=VQSRTrancheSNP99.90to100.00+,Description="Truth sensitivity tranche level for SNP model at VQS Lod < -168942.1998">
+##FILTER=<ID=VQSRTrancheSNP99.90to100.00,Description="Truth sensitivity tranche level for SNP model at VQS Lod: -168942.1998 <= x < -4.1147">
+##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
+##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
+##GATKCommandLine.ApplyRecalibration.2=<ID=ApplyRecalibration,Version=3.6-119-ga159770,Date="Fri Dec 02 10:17:44 EST 2016",Epoch=1480691864027,CommandLineOptions="analysis_type=ApplyRecalibration input_file=[] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=[/seq/references/Homo_sapiens_assembly19/v1/variant_calling/wgs_calling_regions.v1.interval_list] excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=1000 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false input=[(RodBinding name=input source=recalibrated_indel.vcf)] recal_file=(RodBinding name=recal_file source=recal_snp.vcf) tranches_file=tranches.txt out=/dsde/working/sam/cnn/recalibrated.vcf ts_filter_level=99.0 useAlleleSpecificAnnotations=false lodCutoff=null ignore_filter=null ignore_all_filters=false excludeFiltered=false mode=SNP filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false">
+##GATKCommandLine.ApplyRecalibration=<ID=ApplyRecalibration,Version=3.6-119-ga159770,Date="Fri Dec 02 10:09:39 EST 2016",Epoch=1480691379475,CommandLineOptions="analysis_type=ApplyRecalibration input_file=[] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=[/seq/references/Homo_sapiens_assembly19/v1/variant_calling/wgs_calling_regions.v1.interval_list] excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=1000 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false input=[(RodBinding name=input source=na12878_bamout.raw.snps.indels.vcf)] recal_file=(RodBinding name=recal_file source=recal_indel.vcf) tranches_file=tranches_indel.txt out=/dsde/working/sam/cnn/recalibrated_indel.vcf ts_filter_level=99.0 useAlleleSpecificAnnotations=false lodCutoff=null ignore_filter=null ignore_all_filters=false excludeFiltered=false mode=INDEL filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false">
+##GATKCommandLine.HaplotypeCaller=<ID=HaplotypeCaller,Version=3.6-117-gf5379ae,Date="Wed Nov 23 16:25:09 EST 2016",Epoch=1479936309289,CommandLineOptions="analysis_type=HaplotypeCaller input_file=[/seq/picard_aggregation/LCSET-6205/Solexa-269365,_PCR-Free_pool/current/Solexa-269365,_PCR-Free_pool.bam] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=500 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false out=/dsde/working/sam/cnn/na12878_bamout.raw.snps.indels.vcf likelihoodCalculationEngine=PairHMM heterogeneousKmerSizeResolution=COMBO_MIN dbsnp=(RodBinding name=dbsnp source=/seq/references/Homo_sapiens_assembly19/v1/variant_calling/vqsr_resources/WGS/v2/dbsnp_138.b37.vcf.gz) dontTrimActiveRegions=false maxDiscARExtension=25 maxGGAARExtension=300 paddingAroundIndels=150 paddingAroundSNPs=20 comp=[] annotation=[] excludeAnnotation=[] group=[StandardAnnotation, StandardHCAnnotation] debug=false useFilteredReadsForAnnotations=false emitRefConfidence=NONE bamWriterType=CALLED_HAPLOTYPES emitDroppedReads=false disableOptimizations=false annotateNDA=false useNewAFCalculator=false heterozygosity=0.001 indel_heterozygosity=1.25E-4 heterozygosity_stdev=0.01 standard_min_confidence_threshold_for_calling=10.0 standard_min_confidence_threshold_for_emitting=30.0 max_alternate_alleles=6 max_genotype_count=1024 max_num_PL_values=100 input_prior=[] sample_ploidy=2 genotyping_mode=DISCOVERY alleles=(RodBinding name= source=UNBOUND) contamination_fraction_to_filter=0.0 contamination_fraction_per_sample_file=null p_nonref_model=null exactcallslog=null output_mode=EMIT_VARIANTS_ONLY allSitePLs=false gcpHMM=10 pair_hmm_implementation=VECTOR_LOGLESS_CACHING pair_hmm_sub_implementation=ENABLE_ALL always_load_vector_logless_PairHMM_lib=false phredScaledGlobalReadMismappingRate=45 noFpga=false sample_name=null kmerSize=[10, 25] dontIncreaseKmerSizesForCycles=false allowNonUniqueKmersInRef=false numPruningSamples=1 recoverDanglingHeads=false doNotRecoverDanglingBranches=false minDanglingBranchLength=4 consensus=false maxNumHaplotypesInPopulation=128 errorCorrectKmers=false minPruning=2 debugGraphTransformations=false allowCyclesInKmerGraphToGeneratePaths=false graphOutput=null kmerLengthForReadErrorCorrection=25 minObservationsForKmerToBeSolid=20 GVCFGQBands=[1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 70, 80, 90, 99] indelSizeToEliminateInRefModel=10 min_base_quality_score=10 includeUmappedReads=false useAllelesTrigger=false doNotRunPhysicalPhasing=true keepRG=null justDetermineActiveRegions=false dontGenotype=false dontUseSoftClippedBases=false captureAssemblyFailureBAM=false errorCorrectReads=false pcr_indel_model=CONSERVATIVE maxReadsInRegionPerSample=10000 minReadsPerAlignmentStart=10 mergeVariantsViaLD=false activityProfileOut=null activeRegionOut=null activeRegionIn=null activeRegionExtension=null forceActive=false activeRegionMaxSize=null bandPassSigma=null maxProbPropagationDistance=50 activeProbabilityThreshold=0.002 min_mapping_quality_score=20 filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
+##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
+##INFO=<ID=CNN_1D,Number=1,Type=Float,Description="Log odds of being a true variant versus being false under the trained 1D Convolutional Neural Network">
+##INFO=<ID=ClippingRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref number of hard clipped bases">
+##INFO=<ID=DB,Number=0,Type=Flag,Description="dbSNP Membership">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
+##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Stop position of the interval">
+##INFO=<ID=ExcessHet,Number=1,Type=Float,Description="Phred-scaled p-value for exact test of excess heterozygosity">
+##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias">
+##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes">
+##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation">
+##INFO=<ID=MLEAC,Number=A,Type=Integer,Description="Maximum likelihood expectation (MLE) for the allele counts (not necessarily the same as the AC), for each ALT allele, in the same order as listed">
+##INFO=<ID=MLEAF,Number=A,Type=Float,Description="Maximum likelihood expectation (MLE) for the allele frequency (not necessarily the same as the AF), for each ALT allele, in the same order as listed">
+##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality">
+##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities">
+##INFO=<ID=NEGATIVE_TRAIN_SITE,Number=0,Type=Flag,Description="This variant was used to build the negative training set of bad variants">
+##INFO=<ID=POSITIVE_TRAIN_SITE,Number=0,Type=Flag,Description="This variant was used to build the positive training set of good variants">
+##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth">
+##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias">
+##INFO=<ID=SOR,Number=1,Type=Float,Description="Symmetric Odds Ratio of 2x2 contingency table to detect strand bias">
+##INFO=<ID=VQSLOD,Number=1,Type=Float,Description="Log odds of being a true variant versus being false under the trained gaussian mixture model">
+##INFO=<ID=culprit,Number=1,Type=String,Description="The annotation which was the worst performing in the Gaussian mixture model, likely the reason why the variant was filtered out">
+##contig=<ID=1,length=249250621>
+##contig=<ID=2,length=243199373>
+##contig=<ID=3,length=198022430>
+##contig=<ID=4,length=191154276>
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+##contig=<ID=GL000192.1,length=547496>
+##contig=<ID=NC_007605,length=171823>
+##reference=file:///seq/references/Homo_sapiens_assembly19/v1/Homo_sapiens_assembly19.fasta
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878
+20	61098	rs6078030	C	T	91.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.060;CNN_1D=2.432;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.20;ReadPosRankSum=0.120;SOR=0.941;VQSLOD=22.07;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,5:9:99:120,0,107
+20	61138	rs140305189	C	CT	112.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.240;CNN_1D=0.402;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.39;ReadPosRankSum=-0.235;SOR=1.179;VQSLOD=6.21;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:5,7:12:93:150,0,93
+20	61795	rs4814683	G	T	316.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;CNN_1D=2.803;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.67;ReadPosRankSum=-1.332;SOR=0.136;VQSLOD=23.09;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,12:19:99:345,0,178
+20	63244	rs6139074	A	C	200.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.596;CNN_1D=1.905;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.57;ReadPosRankSum=-0.973;SOR=0.527;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,10:19:99:229,0,239
+20	63799	rs1418258	C	T	231.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.083;CNN_1D=3.022;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.20;ReadPosRankSum=0.527;SOR=0.495;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,10:19:99:260,0,228
+20	65900	rs6053810	G	A	149.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.612;CNN_1D=2.216;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=2.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.32;ReadPosRankSum=-0.837;SOR=0.669;VQSLOD=22.47;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,7:18:99:178,0,263
+20	66370	rs6054257	G	A	312.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.961;CNN_1D=2.571;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=1.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.22;ReadPosRankSum=0.049;SOR=1.432;VQSLOD=22.94;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,12:22:99:341,0,263
+20	66720	.	C	A	447.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.071;CNN_1D=3.301;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.47;ReadPosRankSum=-0.097;SOR=1.739;VQSLOD=20.70;culprit=QD	GT:AD:DP:GQ:PL	0/1:6,17:23:99:476,0,123
+20	67500	rs112142516	T	TTGGTATCTAG	321.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;CNN_1D=1.890;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=22.98;ReadPosRankSum=0.501;SOR=0.223;VQSLOD=7.26;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,8:14:99:359,0,689
+20	68749	rs6086616	T	C	407.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.793;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=27.18;SOR=1.473;VQSLOD=21.53;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:436,45,0
+20	69506	.	G	GACAC,GACACAC	613.73	PASS	AC=1,1;AF=0.500,0.500;AN=2;CNN_1D=0.258;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.88;SOR=1.765;VQSLOD=6.41;culprit=FS	GT:AD:DP:GQ:PL	1/2:0,8,6:14:99:651,186,139,258,0,211
+20	70484	rs58430707	CTCTT	C	478.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.449;CNN_1D=0.506;ClippingRankSum=0.000;DB;DP=23;ExcessHet=3.0103;FS=4.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=20.81;ReadPosRankSum=0.975;SOR=2.215;VQSLOD=6.32;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:10,13:23:99:516,0,555
+20	70980	rs60263736	G	A	308.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.485;CNN_1D=3.214;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.44;ReadPosRankSum=0.963;SOR=0.608;VQSLOD=22.45;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,13:20:99:337,0,175
+20	72104	rs11087028	TA	T	183.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.389;CNN_1D=0.634;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.21;ReadPosRankSum=-1.070;SOR=1.015;VQSLOD=7.38;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:10,8:18:99:221,0,281
+20	72892	rs16987437	G	A	118.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.114;CNN_1D=0.588;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=2.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.66;ReadPosRankSum=0.801;SOR=1.688;VQSLOD=22.90;culprit=MQ	GT:AD:DP:GQ:PL	0/1:14,7:21:99:147,0,390
+20	73036	rs11483976	C	CT	47.52	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;CNN_1D=-1.999;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.92;ReadPosRankSum=-0.210;SOR=3.590;VQSLOD=3.86;culprit=SOR	GT:AD:DP:GQ:PL	0/1:1,5:6:7:84,0,7
+20	73610	rs33976266	CT	C	20.23	PASS	AC=2;AF=1.00;AN=2;BaseQRankSum=-0.253;CNN_1D=-3.027;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=4.05;ReadPosRankSum=-0.319;SOR=1.447;VQSLOD=5.49;culprit=QD	GT:AD:DP:GQ:PL	1/1:1,4:5:4:56,4,0
+20	74347	rs6135141	G	A	152.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.336;CNN_1D=2.104;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.55;ReadPosRankSum=1.036;SOR=0.735;VQSLOD=22.99;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,7:16:99:181,0,235
+20	74729	rs11378566	G	GT	206.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.509;CNN_1D=0.356;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.77;ReadPosRankSum=-0.782;SOR=1.085;VQSLOD=7.56;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:4,10:14:73:244,0,73
+20	76771	rs41276376	C	T	271.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.856;CNN_1D=2.488;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-1.857;SOR=0.694;VQSLOD=22.06;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,11:18:99:300,0,169
+20	76962	rs6111385	T	C	258.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.990;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=25.88;SOR=1.609;VQSLOD=19.32;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,10:10:30:287,30,0
+20	79234	rs6045990	T	C	97.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.725;CNN_1D=1.356;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=2.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.15;ReadPosRankSum=-0.407;SOR=0.707;VQSLOD=22.29;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,5:12:99:126,0,205
+20	80481	rs73068355	G	C	163.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;CNN_1D=2.800;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.20;ReadPosRankSum=-0.035;SOR=1.609;VQSLOD=21.25;culprit=MQ	GT:AD:DP:GQ:PL	0/1:2,7:9:44:192,0,44
+20	80655	rs2196239	A	G	755.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.505;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.49;SOR=2.124;VQSLOD=21.40;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,24:24:72:784,72,0
+20	82074	rs34888760	A	C	325.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.220;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.53;QD=28.04;SOR=1.179;VQSLOD=3.95;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,8:8:24:354,24,0
+20	82079	rs34120808	G	A	325.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.206;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.53;QD=30.87;SOR=1.179;VQSLOD=4.48;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,8:8:24:354,24,0
+20	82217	rs1836442	G	A	356.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.144;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=27.44;SOR=0.836;VQSLOD=20.29;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:38:385,38,0
+20	83250	rs36222059	CTGTGTGTG	C	517.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-1.687;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=27.23;SOR=1.179;VQSLOD=5.82;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,13:13:39:555,39,0
+20	83260	rs200208322	G	C	526.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-3.846;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=1.179;VQSLOD=21.34;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:555,39,0
+20	83275	rs140064768	T	C	458.56	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.943;CNN_1D=-2.196;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=32.75;ReadPosRankSum=1.998;SOR=1.022;VQSLOD=19.09;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,12:14:7:486,0,7
+20	90008	rs1858595	C	A	891.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.050;DB;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=33.03;SOR=0.765;VQSLOD=21.46;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,27:27:81:920,81,0
+20	91088	rs2002370	C	T	597.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.913;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.46;SOR=1.292;VQSLOD=22.20;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,19:19:57:626,57,0
+20	91508	rs6051659	G	A	838.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.972;DB;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.96;SOR=1.382;VQSLOD=21.38;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,28:28:84:867,84,0
+20	91707	rs8122066	C	T	207.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;CNN_1D=1.607;ClippingRankSum=0.000;DB;DP=23;ExcessHet=3.0103;FS=3.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.03;ReadPosRankSum=-0.968;SOR=1.299;VQSLOD=23.12;culprit=MQ	GT:AD:DP:GQ:PL	0/1:14,9:23:99:236,0,388
+20	92527	rs1418260	A	G	632.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.167;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.37;SOR=0.693;VQSLOD=20.13;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,24:24:71:661,71,0
+20	93440	rs6051847	A	G	221.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.851;CNN_1D=2.883;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.84;ReadPosRankSum=-0.815;SOR=1.179;VQSLOD=22.61;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,10:14:95:250,0,95
+20	93931	rs6051884	G	A	89.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;CNN_1D=2.719;ClippingRankSum=0.000;DB;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.96;ReadPosRankSum=0.000;SOR=1.609;VQSLOD=21.38;culprit=MQ	GT:AD:DP:GQ:PL	0/1:2,4:6:48:118,0,48
+20	100699	rs6116236	C	T	226.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.740;CNN_1D=2.100;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.94;ReadPosRankSum=-0.973;SOR=0.892;VQSLOD=23.04;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,9:19:99:255,0,259
+20	101362	rs6139361	G	A	142.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.418;CNN_1D=2.821;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.28;ReadPosRankSum=-0.084;SOR=0.527;VQSLOD=22.60;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,6:10:99:171,0,105
+20	102181	rs6052493	T	C	224.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.791;CNN_1D=1.487;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.49;ReadPosRankSum=-1.461;SOR=1.781;VQSLOD=22.75;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,9:18:99:253,0,220
+20	102799	rs6107455	G	A	224.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;CNN_1D=2.922;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=4.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.22;ReadPosRankSum=0.197;SOR=0.793;VQSLOD=23.28;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,10:17:99:253,0,192
+20	103517	rs3968581	A	T	458.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;CNN_1D=2.166;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=3.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.64;ReadPosRankSum=0.335;SOR=1.188;VQSLOD=22.93;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,19:26:99:487,0,158
+20	104899	rs6116429	C	T	229.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.468;CNN_1D=2.840;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.94;ReadPosRankSum=0.587;SOR=0.330;VQSLOD=22.48;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,10:21:99:258,0,295
+20	106635	rs4813713	G	A	174.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=2.505;CNN_1D=2.576;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=5.756;MLEAC=1;MLEAF=0.500;MQ=59.72;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=13.44;ReadPosRankSum=0.001;SOR=0.515;VQSLOD=0.126;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,7:13:99:203,0,138
+20	106703	rs34411437	C	CT	31.07	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-1.219;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.35;QD=7.77;SOR=3.258;VQSLOD=0.227;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,4:4:11:68,11,0
+20	108286	rs6116576	T	G	71.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;CNN_1D=1.310;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.97;ReadPosRankSum=1.242;SOR=0.105;VQSLOD=21.91;culprit=MQ	GT:AD:DP:GQ:PL	0/1:3,5:8:72:100,0,72
+20	108328	rs1954267	A	C	190.79	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.069;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=23.85;SOR=1.179;VQSLOD=19.06;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,8:8:23:219,23,0
+20	110058	rs6053093	G	C	269.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.355;CNN_1D=2.363;ClippingRankSum=0.000;DB;DP=24;ExcessHet=3.0103;FS=1.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.24;ReadPosRankSum=0.036;SOR=0.292;VQSLOD=22.44;culprit=MQ	GT:AD:DP:GQ:PL	0/1:13,11:24:99:298,0,299
+20	110098	rs6053101	A	G	182.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.900;CNN_1D=2.395;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.14;ReadPosRankSum=1.403;SOR=0.340;VQSLOD=22.44;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,8:20:99:211,0,316
+20	110702	rs8124420	C	T	190.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.050;CNN_1D=3.178;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.150;SOR=0.627;VQSLOD=21.89;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,8:13:84:219,0,84
+20	110979	rs8118833	A	C,G	119.77	VQSRTrancheSNP99.00to99.90	AC=1,1;AF=0.500,0.500;AN=2;CNN_1D=2.413;DB;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=42.09;QD=29.94;SOR=0.693;VQSLOD=-1.987e+00;culprit=MQ	GT:AD:DP:GQ:PL	1/2:0,2,2:4:70:148,70,78,84,0,78
+20	110980	rs199627766	T	C	49.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;CNN_1D=-2.171;ClippingRankSum=0.000;DB;DP=5;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=42.09;MQRankSum=-0.674;QD=12.44;ReadPosRankSum=-0.674;SOR=2.209;VQSLOD=-1.202e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:2,2:4:78:78,0,78
+20	111377	.	A	C	264.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.285;CNN_1D=-0.978;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=36.76;MQRankSum=0.481;QD=13.94;ReadPosRankSum=-1.331;SOR=0.971;VQSLOD=-2.174e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,8:19:99:293,0,635
+20	111383	.	T	C	264.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.322;CNN_1D=-1.574;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=36.76;MQRankSum=0.481;QD=13.94;ReadPosRankSum=-1.447;SOR=0.971;VQSLOD=-2.175e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,8:19:99:293,0,635
+20	111871	.	A	G	59.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=0.183;CNN_1D=-3.591;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=33.08;MQRankSum=-0.076;QD=5.43;ReadPosRankSum=0.473;SOR=0.061;VQSLOD=-2.711e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,4:11:88:88,0,176
+20	112015	.	G	A	82.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=3.361;CNN_1D=-4.031;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=5.332;MLEAC=1;MLEAF=0.500;MQ=30.13;MQRankSum=-0.280;QD=6.37;ReadPosRankSum=0.917;SOR=0.674;VQSLOD=-3.302e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,5:13:99:111,0,160
+20	112789	.	T	A	22.79	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.288;CNN_1D=-2.488;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.76;MQRankSum=0.000;QD=1.75;ReadPosRankSum=0.934;SOR=1.508;VQSLOD=-1.176e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,2:13:51:51,0,476
+20	112790	.	G	A	19.81	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.294;CNN_1D=-2.414;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.76;MQRankSum=0.000;QD=1.52;ReadPosRankSum=0.934;SOR=1.508;VQSLOD=-1.176e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,2:13:48:48,0,505
+20	112791	.	G	A	19.81	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.294;CNN_1D=-3.397;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.76;MQRankSum=0.000;QD=1.52;ReadPosRankSum=0.934;SOR=1.508;VQSLOD=-1.176e+01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,2:13:48:48,0,505
+20	112796	.	C	A	16.86	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;CNN_1D=-5.310;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=43.67;MQRankSum=-0.376;QD=1.12;ReadPosRankSum=1.112;SOR=1.609;VQSLOD=-1.091e+01;culprit=QD	GT:AD:DP:GQ:PL	0/1:13,2:15:45:45,0,534
+20	112877	rs8182936	C	T	388.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=1.487;CNN_1D=1.820;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=48.04;MQRankSum=0.834;QD=20.46;ReadPosRankSum=-1.020;SOR=1.206;VQSLOD=-6.779e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,14:19:99:417,0,102
+20	114180	rs372893698	T	C	33.74	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=-2.432;DB;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=33.73;QD=16.87;SOR=2.303;VQSLOD=-1.139e+01;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,2:2:6:61,6,0
+20	116028	rs201726189	G	A	108.03	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=0.212;DB;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=36.99;QD=27.01;SOR=1.609;VQSLOD=-5.843e+00;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,4:4:12:136,12,0
+20	116405	rs6107677	G	A	125.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.722;CNN_1D=1.725;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.04;MQRankSum=2.261;QD=8.38;ReadPosRankSum=0.072;SOR=1.230;VQSLOD=-3.279e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:9,6:15:99:154,0,260
+20	116545	rs6116924	G	A	170.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.807;CNN_1D=0.368;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.86;MQRankSum=-1.383;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=9.49;ReadPosRankSum=1.068;SOR=0.412;VQSLOD=-2.044e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:10,8:18:99:199,0,247
+20	116787	rs6053657	A	G	160.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.150;CNN_1D=1.046;ClippingRankSum=0.000;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.70;ReadPosRankSum=-1.262;SOR=0.760;VQSLOD=22.39;culprit=MQ	GT:AD:DP:GQ:PL	0/1:15,9:24:99:189,0,366
+20	117309	rs60898271	G	GCAGGATTTCAT	448.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.285;CNN_1D=1.228;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.93;ReadPosRankSum=-1.226;SOR=0.773;VQSLOD=5.72;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,12:18:99:486,0,718
+20	119645	rs34522429	G	GT	206.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.384;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=61.78;QD=29.54;SOR=0.941;VQSLOD=5.31;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,7:7:21:244,21,0
+20	120122	rs73611627	A	AAG	907.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.862;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=0.784;VQSLOD=4.18;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,21:21:63:945,63,0
+20	120471	rs6117088	A	G	104.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;CNN_1D=1.702;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=13.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.64;ReadPosRankSum=1.383;SOR=1.839;VQSLOD=20.51;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,5:9:99:133,0,106
+20	120750	rs35907573	C	CAATT	772.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.122;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.20;SOR=0.804;VQSLOD=5.38;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,17:17:54:810,54,0
+20	121310	rs6053983	A	C	345.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;CNN_1D=2.181;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.29;ReadPosRankSum=1.700;SOR=0.892;VQSLOD=22.26;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,13:20:99:374,0,172
+20	121824	rs6038402	C	T	156.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;CNN_1D=1.844;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.25;ReadPosRankSum=-0.693;SOR=0.971;VQSLOD=22.67;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,8:19:99:185,0,265
+20	121976	rs6038405	G	A	251.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.040;CNN_1D=2.894;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.99;ReadPosRankSum=-0.098;SOR=0.368;VQSLOD=23.01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,10:18:99:280,0,156
+20	122508	rs6117214	G	A	72.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.215;CNN_1D=-0.053;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.06;ReadPosRankSum=0.799;SOR=2.494;VQSLOD=22.33;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,4:12:99:101,0,192
+20	122806	rs11472367	T	TTA	288.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.314;CNN_1D=0.598;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.04;ReadPosRankSum=-0.533;SOR=0.627;VQSLOD=7.76;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:8,10:18:99:326,0,250
+20	123651	rs139969869	G	GT	130.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.030;CNN_1D=1.050;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=0.361;SOR=0.330;VQSLOD=6.51;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:4,7:11:88:168,0,88
+20	124302	rs6038528	A	C	215.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.517;CNN_1D=3.231;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.41;ReadPosRankSum=0.114;SOR=0.399;VQSLOD=22.85;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,9:14:99:244,0,106
+20	124412	rs6054328	C	T	203.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.193;CNN_1D=3.151;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.58;ReadPosRankSum=0.842;SOR=0.892;VQSLOD=22.88;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,8:15:99:232,0,183
+20	125538	rs6117364	G	C	233.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;CNN_1D=2.709;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.30;ReadPosRankSum=-0.843;SOR=0.527;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,10:19:99:262,0,213
+20	126155	rs11467497	GCAAA	G	172.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;CNN_1D=0.121;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=2.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.64;ReadPosRankSum=-0.578;SOR=1.445;VQSLOD=7.21;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:14,6:20:99:210,0,825
+20	126310	rs11467417	ACC	A	364.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.904;CNN_1D=0.850;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=1.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.03;ReadPosRankSum=-0.754;SOR=0.340;VQSLOD=7.59;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:15,11:26:99:402,0,571
+20	126529	rs6133348	G	A	504.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.689;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.04;SOR=1.179;VQSLOD=20.18;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:53:533,53,0
+20	126600	rs6117403	C	A	686.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.880;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.86;SOR=1.426;VQSLOD=21.75;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,23:23:69:715,69,0
+20	126614	rs6117404	T	C	770.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.304;DB;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.83;SOR=1.136;VQSLOD=21.25;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,25:25:75:799,75,0
+20	126730	rs6117416	C	T	486.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.305;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.42;SOR=0.693;VQSLOD=21.21;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:515,48,0
+20	126760	rs6117417	C	T	496.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.294;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.05;SOR=0.941;VQSLOD=21.79;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:525,48,0
+20	126923	rs4815938	C	A	846.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.692;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.14;SOR=0.892;VQSLOD=21.98;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:875,60,0
+20	126930	rs6085677	A	T	875.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.944;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.17;SOR=0.892;VQSLOD=22.36;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:63:904,63,0
+20	127720	rs753217	A	C	887.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.947;DB;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.71;SOR=0.836;VQSLOD=22.24;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,28:28:84:916,84,0
+20	128713	rs735669	C	G	605.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.387;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.29;SOR=1.402;VQSLOD=22.23;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:634,60,0
+20	129613	rs4815966	G	A	836.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.552;DB;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.99;SOR=0.922;VQSLOD=22.51;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,27:27:81:865,81,0
+20	129864	rs6054706	C	T	639.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.960;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.74;POSITIVE_TRAIN_SITE;QD=30.47;SOR=1.828;VQSLOD=5.01;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,21:21:63:668,63,0
+20	131362	rs6054812	C	T	665.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.931;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.26;SOR=0.874;VQSLOD=20.92;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,22:22:66:694,66,0
+20	131495	rs1592156	T	C	474.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.313;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.65;SOR=1.473;VQSLOD=22.33;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:503,45,0
+20	131505	rs140518980	CTCT	C	682.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.900;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.52;SOR=1.244;VQSLOD=6.57;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,16:16:48:720,48,0
+20	131657	rs1592157	A	G	525.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.955;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=25.04;SOR=0.784;VQSLOD=20.33;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,21:21:62:554,62,0
+20	131948	rs146759898	C	CCA	879.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.608;DB;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=0.941;VQSLOD=3.93;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,25:25:75:917,75,0
+20	132304	rs79467485	TA	T	216.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.923;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=24.08;SOR=0.892;VQSLOD=4.74;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,9:9:27:254,27,0
+20	133158	rs6054966	T	A	173.84	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.612;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.97;SOR=1.329;VQSLOD=21.20;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,6:6:18:202,18,0
+20	134017	rs6055045	A	G	578.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.370;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.15;SOR=1.863;VQSLOD=21.72;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:607,54,0
+20	134284	rs6055069	T	C	526.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.335;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.26;SOR=1.179;VQSLOD=21.89;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:555,54,0
+20	134366	rs6055074	A	G	186.79	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.948;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=23.35;SOR=0.693;VQSLOD=19.09;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,8:8:23:215,23,0
+20	134421	rs6055080	C	T	365.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.558;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=2.093;VQSLOD=20.65;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:394,27,0
+20	134428	rs201393979	CAAAAAAAAA	C	356.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-2.477;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.97;SOR=2.093;VQSLOD=4.57;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,9:9:27:394,27,0
+20	134476	rs6055084	T	C	465.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.739;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.05;SOR=1.911;VQSLOD=21.91;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:494,45,0
+20	134643	rs6038867	C	T	526.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.158;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.99;SOR=1.371;VQSLOD=21.72;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:555,51,0
+20	134844	rs1342845	T	C	636.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.172;DB;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=25.47;SOR=1.609;VQSLOD=20.91;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,25:25:74:665,74,0
+20	134931	rs2316226	T	G	730.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.967;DB;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.45;SOR=0.859;VQSLOD=22.50;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,24:24:71:759,71,0
+20	135115	.	G	GTT	366.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.048;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=37.18;SOR=0.892;VQSLOD=5.93;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,9:9:27:404,27,0
+20	135118	rs56303689	C	CAT	366.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.875;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=0.892;VQSLOD=5.22;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,9:9:27:404,27,0
+20	135120	rs56222448	C	CACAGGAAGACTATAAATAACT	492.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.740;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.75;SOR=0.892;VQSLOD=6.42;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,9:9:36:530,36,0
+20	135488	rs1342846	C	T	624.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.943;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.24;SOR=0.892;VQSLOD=22.07;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:653,60,0
+20	137127	rs1935387	A	G	631.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.373;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.59;SOR=0.892;VQSLOD=22.08;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:660,60,0
+20	137518	rs34765144	GTA	G	520.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.178;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.63;POSITIVE_TRAIN_SITE;QD=34.72;SOR=2.448;VQSLOD=5.91;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,15:15:45:558,45,0
+20	137674	rs2117453	G	A	483.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.635;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.24;SOR=1.244;VQSLOD=20.94;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:512,48,0
+20	137933	rs1434790	C	G	573.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.091;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.20;SOR=0.793;VQSLOD=22.53;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,19:19:57:602,57,0
+20	138004	rs6055356	G	C	642.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.531;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.61;SOR=0.784;VQSLOD=21.88;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,21:21:63:671,63,0
+20	138178	rs3216039	GC	G	549.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.751;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=61.34;POSITIVE_TRAIN_SITE;QD=34.36;SOR=0.941;VQSLOD=7.41;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,16:16:48:587,48,0
+20	138570	rs36204800	ATATGTGTG	A	466.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-0.062;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=63.51;POSITIVE_TRAIN_SITE;QD=30.09;SOR=3.611;VQSLOD=3.27;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,12:12:36:504,36,0
+20	138601	rs6086288	T	C	603.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-0.014;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.72;QD=33.06;SOR=1.112;VQSLOD=5.13;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,15:15:45:632,45,0
+20	138603	rs3859673	T	C	603.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-0.400;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.15;SOR=0.976;VQSLOD=21.04;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:45:632,45,0
+20	139362	rs6055460	G	A	648.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.034;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.44;SOR=1.402;VQSLOD=21.33;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,20:20:60:677,60,0
+20	139745	rs4142304	T	C	392.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.527;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.21;SOR=1.609;VQSLOD=22.12;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:421,39,0
+20	139841	rs4142303	A	T	286.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.912;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.86;SOR=4.615;VQSLOD=15.84;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:315,27,0
+20	139915	rs11473274	T	TAA	262.75	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.668;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.84;SOR=0.693;VQSLOD=5.12;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,8:8:24:300,24,0
+20	140086	rs6039029	G	A	734.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.700;DB;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.39;SOR=0.770;VQSLOD=19.94;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,25:25:74:763,74,0
+20	140280	rs6039035	C	T	716.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.840;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.58;SOR=0.874;VQSLOD=22.32;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,22:22:66:745,66,0
+20	140396	rs10593135	TTTG	T	637.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.544;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=33.41;SOR=1.473;VQSLOD=6.75;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,15:15:45:675,45,0
+20	142021	rs6118147	G	A	406.77	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=0.393;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=38.44;QD=29.05;SOR=2.985;VQSLOD=-4.587e+00;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:42:435,42,0
+20	142229	rs6086398	T	C	249.78	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=0.222;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=30.98;QD=27.75;SOR=1.402;VQSLOD=-1.116e+01;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:278,27,0
+20	142279	rs6086399	C	A	298.77	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=0.124;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=31.82;QD=27.16;SOR=1.802;VQSLOD=-9.960e+00;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,11:11:33:327,33,0
+20	142559	rs6055749	C	G	274.77	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=1.205;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=37.95;QD=24.98;SOR=1.802;VQSLOD=-5.330e+00;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,11:11:32:303,32,0
+20	142792	rs112475384	T	C	136.84	VQSRTrancheSNP99.90to100.00	AC=2;AF=1.00;AN=2;CNN_1D=0.658;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=37.24;QD=22.81;SOR=1.329;VQSLOD=-6.007e+00;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,6:6:18:165,18,0
+20	143447	rs6118192	G	A	317.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.354;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.70;QD=28.89;SOR=0.859;VQSLOD=4.22;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,11:11:33:346,33,0
+20	143918	rs1836440	C	T	373.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.771;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.75;SOR=1.609;VQSLOD=21.16;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:402,39,0
+20	144382	rs6055874	T	C	465.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.930;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.11;SOR=1.609;VQSLOD=21.72;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:494,48,0
+20	144535	rs6055884	A	C	792.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.439;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=33.74;SOR=0.793;VQSLOD=21.81;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,19:19:57:821,57,0
+20	144560	rs6077375	T	G	781.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.373;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=22.90;SOR=0.914;VQSLOD=16.94;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,18:18:54:810,54,0
+20	144570	rs6055888	A	G	815.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.579;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=24.33;SOR=0.793;VQSLOD=19.51;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,19:19:57:844,57,0
+20	144832	rs11481537	C	CT	423.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.822;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.59;SOR=2.147;VQSLOD=5.86;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,13:13:39:461,39,0
+20	144884	rs71327422	CCTT	C	547.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.221;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.60;SOR=2.147;VQSLOD=5.44;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,13:13:39:585,39,0
+20	144899	rs6039198	T	C	443.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.161;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.72;POSITIVE_TRAIN_SITE;QD=29.58;SOR=1.911;VQSLOD=5.83;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:472,45,0
+20	145210	rs6055936	G	A	155.81	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.129;DB;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=22.26;SOR=4.174;VQSLOD=15.68;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,7:7:20:184,20,0
+20	145257	rs11483666	G	GC	362.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.179;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.97;SOR=2.303;VQSLOD=6.25;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,10:10:30:400,30,0
+20	145413	rs6086539	A	G	107.90	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.888;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=21.58;SOR=1.022;VQSLOD=18.31;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,5:5:15:136,15,0
+20	145749	rs6039221	C	T	324.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-3.045;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=0.693;VQSLOD=19.88;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:35:362,35,0
+20	146995	rs6086589	A	T	572.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.253;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.15;SOR=1.022;VQSLOD=21.95;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,19:19:57:601,57,0
+20	148084	rs4816104	T	C	535.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.948;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.20;SOR=1.022;VQSLOD=21.18;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,19:19:57:564,57,0
+20	148480	rs4816108	T	C	341.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.692;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.07;SOR=2.494;VQSLOD=18.73;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,11:11:33:370,33,0
+20	149407	rs6056336	C	G	727.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.735;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=33.08;SOR=0.874;VQSLOD=22.64;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,22:22:66:756,66,0
+20	149975	rs6077481	T	C	506.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.025;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.15;SOR=0.914;VQSLOD=21.90;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:535,54,0
+20	151330	rs751596	T	C	459.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.121;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=22.99;SOR=2.531;VQSLOD=17.43;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,20:20:58:488,58,0
+20	152533	rs6056556	G	A	252.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.106;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.71;POSITIVE_TRAIN_SITE;QD=28.09;SOR=0.892;VQSLOD=4.58;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:281,27,0
+20	152570	rs6056559	G	A	286.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.136;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.76;QD=28.68;SOR=1.085;VQSLOD=4.02;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,10:10:30:315,30,0
+20	152797	rs141200285	G	A	244.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=4.268;CNN_1D=2.258;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=0.979;SOR=0.813;VQSLOD=22.04;culprit=MQ	GT:AD:DP:GQ:PL	0/1:16,10:26:99:273,0,373
+20	152972	rs6056585	T	C	806.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.787;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.58;POSITIVE_TRAIN_SITE;QD=25.07;SOR=0.784;VQSLOD=2.99;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,21:21:63:835,63,0
+20	152992	rs6039451	C	G	738.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.751;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.54;POSITIVE_TRAIN_SITE;QD=34.78;SOR=0.793;VQSLOD=4.62;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,19:19:57:767,57,0
+20	153267	rs6056599	T	C	361.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.447;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.15;SOR=0.693;VQSLOD=21.19;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:390,36,0
+20	153298	rs80141825	T	TTC	637.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.307;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=0.818;VQSLOD=4.91;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,15:15:45:675,45,0
+20	153393	rs6039463	C	A	689.77	PASS	AC=2;AF=1.00;AN=2;BaseQRankSum=1.622;CNN_1D=3.797;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=3.188;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=27.59;ReadPosRankSum=-0.586;SOR=0.477;VQSLOD=21.60;culprit=MQ	GT:AD:DP:GQ:PL	1/1:1,24:25:64:718,64,0
+20	153691	rs4098711	T	C	269.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.651;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.31;QD=29.98;SOR=3.056;VQSLOD=3.47;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,9:9:27:298,27,0
+20	154614	rs6039496	T	G	483.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.299;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.24;SOR=0.693;VQSLOD=21.62;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:512,48,0
+20	154710	rs60100130	G	A	93.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;CNN_1D=0.689;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.81;ReadPosRankSum=1.207;SOR=2.303;VQSLOD=21.87;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,6:12:99:122,0,144
+20	155910	rs6140993	T	C	389.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.525;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.22;QD=25.98;SOR=1.112;VQSLOD=2.63;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,15:15:45:418,45,0
+20	155955	rs6140994	A	G	277.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.827;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.96;POSITIVE_TRAIN_SITE;QD=25.25;SOR=0.859;VQSLOD=4.16;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,11:11:33:306,33,0
+20	156165	rs148702419	C	G	719.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.064;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.61;QD=28.03;SOR=0.804;VQSLOD=2.75;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:748,51,0
+20	156173	rs6141010	C	T	756.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.765;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.57;QD=23.95;SOR=0.693;VQSLOD=2.57;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,18:18:54:785,54,0
+20	156329	rs6141014	G	C	645.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.207;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.74;QD=25.41;SOR=1.112;VQSLOD=3.23;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,15:15:45:674,45,0
+20	156330	rs6141015	G	T	645.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.126;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.74;QD=32.88;SOR=1.112;VQSLOD=3.93;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,15:15:45:674,45,0
+20	156534	rs6141019	C	T	1218.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.260;DB;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.86;QD=26.69;SOR=0.997;VQSLOD=2.47;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,28:28:84:1247,84,0
+20	156538	rs6141020	C	T	1218.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.144;DB;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.86;QD=29.50;SOR=0.997;VQSLOD=4.37;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,28:28:84:1247,84,0
+20	156652	rs6141023	C	T	663.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.872;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.46;NEGATIVE_TRAIN_SITE;QD=32.71;SOR=0.941;VQSLOD=2.27;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,16:16:48:692,48,0
+20	156656	rs6141024	A	C	632.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.763;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.22;QD=28.80;SOR=0.976;VQSLOD=3.06;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:45:661,45,0
+20	157157	rs4813900	T	C	597.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.372;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.07;POSITIVE_TRAIN_SITE;QD=33.21;SOR=2.833;VQSLOD=4.40;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,18:18:54:626,54,0
+20	157272	rs6141042	C	T	255.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.814;CNN_1D=0.447;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=59.12;MQRankSum=-0.843;NEGATIVE_TRAIN_SITE;QD=13.46;ReadPosRankSum=-0.450;SOR=1.546;VQSLOD=-5.878e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:9,10:19:99:284,0,233
+20	157522	rs145273759	C	T	385.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.737;CNN_1D=2.453;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=4.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.53;ReadPosRankSum=-0.037;SOR=1.387;VQSLOD=22.50;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,15:22:99:414,0,148
+20	157746	rs6141061	A	C	388.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.034;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.91;SOR=0.836;VQSLOD=19.94;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:417,39,0
+20	157976	rs2873104	A	G	622.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.967;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=0.874;VQSLOD=21.39;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,22:22:66:651,66,0
+20	158114	rs28897484	G	A	577.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.653;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.51;QD=32.10;SOR=1.179;VQSLOD=4.22;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:606,54,0
+20	158315	rs6141082	G	C	263.78	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.301;CNN_1D=3.602;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.77;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=21.98;ReadPosRankSum=-0.517;SOR=0.293;VQSLOD=-6.652e-01;culprit=QD	GT	./.
+20	158434	rs6141085	C	T	461.81	VQSRTrancheSNP99.00to99.90	AC=2;AF=1.00;AN=2;BaseQRankSum=-0.395;CNN_1D=2.835;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=3.522;MLEAC=2;MLEAF=1.00;MQ=55.36;MQRankSum=-0.576;NEGATIVE_TRAIN_SITE;QD=25.66;ReadPosRankSum=-0.660;SOR=0.761;VQSLOD=-1.923e+00;culprit=QD	GT:AD:DP:GQ:PL	1/1:1,17:18:20:490,20,0
+20	158495	rs6118812	A	G	396.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.763;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.40;QD=28.34;SOR=1.765;VQSLOD=4.52;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:42:425,42,0
+20	159289	rs6133774	C	T	738.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.850;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.78;SOR=1.051;VQSLOD=21.41;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,24:24:72:767,72,0
+20	160111	rs57647042	A	AT	160.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.683;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.97;SOR=2.584;VQSLOD=3.75;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,7:7:21:198,21,0
+20	160208	rs6039698	A	G	301.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.611;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=23.21;SOR=2.147;VQSLOD=19.32;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,13:13:38:330,38,0
+20	160533	rs4813916	A	G	554.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.745;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.42;SOR=0.784;VQSLOD=20.58;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,21:21:63:583,63,0
+20	160551	rs4813917	T	C	816.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.254;DB;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.41;SOR=0.846;VQSLOD=22.13;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,26:26:78:845,78,0
+20	161450	rs1080148	G	A	840.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.233;DB;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.34;SOR=1.445;VQSLOD=21.96;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,26:26:78:869,78,0
+20	162683	rs4142305	C	T	540.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.695;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.81;SOR=1.371;VQSLOD=22.14;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:569,51,0
+20	163607	rs10630959	A	AAT	637.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.916;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=34.65;SOR=0.818;VQSLOD=6.98;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,15:15:45:675,45,0
+20	163741	rs11471534	T	TACACAC	1001.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.379;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.15;SOR=0.776;VQSLOD=6.63;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,23:23:72:1039,72,0
+20	164279	rs147696713	G	GAAAAC	178.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.985;CNN_1D=0.716;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=63.51;MQRankSum=2.336;QD=9.93;ReadPosRankSum=0.000;SOR=0.693;VQSLOD=2.38;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:10,8:18:99:216,0,277
+20	164284	rs1832858	G	C,GAAAAC	779.73	PASS	AC=1,1;AF=0.500,0.500;AN=2;CNN_1D=3.341;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=64.95;QD=32.14;SOR=0.793;VQSLOD=4.25;culprit=FS	GT:AD:DP:GQ:PL	1/2:0,8,11:19:99:817,363,308,273,0,213
+20	164340	rs3885194	A	T	618.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.434;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=64.19;POSITIVE_TRAIN_SITE;QD=30.94;SOR=1.127;VQSLOD=4.98;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:647,60,0
+20	165908	rs6074167	T	C	550.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.706;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.60;SOR=0.914;VQSLOD=21.47;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:579,54,0
+20	166727	rs6077904	G	A	514.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.602;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=32.17;SOR=1.609;VQSLOD=21.63;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:543,48,0
+20	166824	rs6040142	G	A	593.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.881;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.25;SOR=1.292;VQSLOD=22.07;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,19:19:57:622,57,0
+20	167310	rs1857091	A	G	682.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.643;DB;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.69;SOR=1.179;VQSLOD=22.19;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,23:23:68:711,68,0
+20	167431	rs1578637	G	A	652.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.941;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=0.892;VQSLOD=20.79;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,20:20:60:681,60,0
+20	168080	rs1342136	A	G	463.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.902;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.92;SOR=0.818;VQSLOD=20.66;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:492,45,0
+20	168466	rs4813042	T	A	631.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.039;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.59;SOR=1.402;VQSLOD=22.45;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,20:20:60:660,60,0
+20	168728	rs4813043	T	A	373.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.687;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.75;SOR=1.179;VQSLOD=21.94;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:402,39,0
+20	169701	rs722829	G	A	421.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.088;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=24.81;SOR=0.804;VQSLOD=20.58;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,17:17:50:450,50,0
+20	169995	rs6040343	T	C	421.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.660;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.12;SOR=0.818;VQSLOD=20.86;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,15:15:45:450,45,0
+20	170589	rs1469782	T	C	381.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.881;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.37;SOR=1.179;VQSLOD=22.05;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:410,39,0
+20	170642	rs1469781	G	A	308.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.482;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.88;SOR=0.693;VQSLOD=21.22;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,10:10:30:337,30,0
+20	171189	rs6078096	C	T	636.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.590;DB;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.47;POSITIVE_TRAIN_SITE;QD=28.94;SOR=0.874;VQSLOD=5.19;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,22:22:66:665,66,0
+20	171316	rs66695480	C	CTT	55.25	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-1.182;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.42;SOR=1.179;VQSLOD=3.40;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,3:3:9:92,9,0
+20	171591	rs6040455	G	A	378.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.588;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.30;POSITIVE_TRAIN_SITE;QD=29.14;SOR=2.147;VQSLOD=4.11;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:407,39,0
+20	171627	rs6033065	G	A	487.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.512;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.21;POSITIVE_TRAIN_SITE;QD=30.49;SOR=1.609;VQSLOD=3.62;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:516,48,0
+20	172356	.	A	T	10.20	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;CNN_1D=-3.263;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.35;MQRankSum=-1.192;NEGATIVE_TRAIN_SITE;QD=1.02;ReadPosRankSum=-1.960;SOR=1.609;VQSLOD=-2.063e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:7,3:10:38:38,0,166
+20	172367	rs34861104	CT	C	95.80	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-2.907;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.27;QD=15.97;SOR=2.303;VQSLOD=3.07;culprit=SOR	GT:AD:DP:GQ:PL	1/1:0,6:6:18:133,18,0
+20	172518	rs2099433	A	G	451.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.532;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.10;SOR=1.179;VQSLOD=18.87;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,18:18:54:480,54,0
+20	172741	rs6040567	G	T	531.77	PASS	AC=2;AF=1.00;AN=2;BaseQRankSum=1.760;CNN_1D=4.008;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=29.54;ReadPosRankSum=-0.397;SOR=0.387;VQSLOD=21.41;culprit=MQ	GT:AD:DP:GQ:PL	1/1:1,17:18:44:560,44,0
+20	173751	rs6040696	G	A	691.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.149;DB;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.08;SOR=1.426;VQSLOD=22.11;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,23:23:68:720,68,0
+20	174069	rs2316227	A	G	363.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.251;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.31;SOR=1.022;VQSLOD=21.68;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:392,36,0
+20	175387	rs6033189	G	A	359.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.112;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.93;POSITIVE_TRAIN_SITE;QD=25.70;SOR=0.693;VQSLOD=3.59;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,14:14:41:388,41,0
+20	176386	rs66906130	CGTGTGT	C	1075.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.297;DB;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.72;POSITIVE_TRAIN_SITE;QD=26.77;SOR=0.941;VQSLOD=6.42;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,25:25:76:1113,76,0
+20	179735	rs76051089	TTAAAA	T	59.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;CNN_1D=-1.788;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=7.068;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.47;ReadPosRankSum=-0.956;SOR=2.807;VQSLOD=4.62;culprit=SOR	GT:AD:DP:GQ:PL	0/1:5,3:8:97:97,0,333
+20	198395	rs6042429	G	A	293.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-4.579;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=24.48;SOR=2.584;VQSLOD=17.41;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,12:12:33:278,33,0
+20	202015	.	T	G	19.87	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;CNN_1D=-2.732;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.84;ReadPosRankSum=1.068;SOR=0.368;VQSLOD=20.68;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,4:7:19:48,0,19
+20	202035	.	T	A	19.81	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;CNN_1D=-2.829;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.83;ReadPosRankSum=0.566;SOR=0.368;VQSLOD=20.69;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,4:7:37:48,0,37
+20	206596	rs6042891	C	T	505.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.028;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.75;SOR=1.061;VQSLOD=19.53;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:534,51,0
+20	211564	rs73058580	T	C	299.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.172;CNN_1D=3.156;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.78;ReadPosRankSum=0.137;SOR=0.136;VQSLOD=22.60;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,12:19:99:328,0,178
+20	212539	rs6043212	C	T	558.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.659;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=34.18;SOR=0.693;VQSLOD=19.97;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,14:14:45:587,45,0
+20	212541	rs6043214	G	C	558.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.105;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=34.96;SOR=0.818;VQSLOD=20.97;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,15:15:45:587,45,0
+20	212674	.	A	AAAAT,AAAATAAATAAAT	574.73	PASS	AC=1,1;AF=0.500,0.500;AN=2;CNN_1D=1.633;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=32.13;SOR=0.693;VQSLOD=5.12;culprit=FS	GT:AD:DP:GQ:PL	1/2:0,7,5:12:99:612,217,188,291,0,265
+20	214373	rs6079868	T	C	134.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;CNN_1D=2.864;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.48;ReadPosRankSum=-0.524;SOR=0.693;VQSLOD=22.08;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,6:10:98:163,0,98
+20	215082	rs6074922	C	T	170.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.372;CNN_1D=2.778;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.23;ReadPosRankSum=-0.711;SOR=0.754;VQSLOD=22.24;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,7:12:70:199,0,70
+20	216750	rs6043516	T	C	351.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.021;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.31;SOR=1.445;VQSLOD=21.20;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:380,36,0
+20	216811	rs6074947	C	T	74.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;CNN_1D=1.826;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.35;ReadPosRankSum=0.674;SOR=0.693;VQSLOD=22.54;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,4:8:82:103,0,82
+20	217074	rs4814401	G	A	244.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.125;CNN_1D=2.199;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.60;ReadPosRankSum=-0.159;SOR=1.085;VQSLOD=22.98;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,10:18:99:273,0,218
+20	217281	rs4814402	G	A	124.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.307;CNN_1D=2.446;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.91;ReadPosRankSum=-0.792;SOR=0.169;VQSLOD=22.78;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,6:14:99:153,0,213
+20	217851	rs4814408	T	C	213.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.939;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.75;SOR=0.892;VQSLOD=19.14;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,9:9:26:242,26,0
+20	218255	rs11087150	A	AG	150.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.652;CNN_1D=-1.773;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=14.236;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.37;ReadPosRankSum=0.422;SOR=3.903;VQSLOD=4.00;culprit=SOR	GT:AD:DP:GQ:PL	0/1:12,6:18:99:188,0,431
+20	219011	rs1418259	A	G	288.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.600;CNN_1D=2.574;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.44;ReadPosRankSum=1.116;SOR=1.022;VQSLOD=22.97;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,12:20:99:317,0,211
+20	219099	rs727829	C	G	374.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.708;CNN_1D=3.604;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.72;ReadPosRankSum=1.154;SOR=1.206;VQSLOD=22.07;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,14:19:99:403,0,112
+20	219362	rs6080091	G	A	83.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;CNN_1D=1.937;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=2.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.62;ReadPosRankSum=0.054;SOR=0.760;VQSLOD=22.23;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,5:11:99:112,0,138
+20	219486	rs11483485	G	GA	24.75	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;CNN_1D=-0.872;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.12;ReadPosRankSum=1.440;SOR=0.693;VQSLOD=6.10;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,3:6:62:62,0,65
+20	220059	rs6043719	C	T	247.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.922;CNN_1D=1.649;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=15.49;ReadPosRankSum=0.571;SOR=1.085;VQSLOD=-4.166e-01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,10:16:99:276,0,112
+20	220085	rs6075005	A	C	371.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.171;CNN_1D=2.044;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;QD=23.24;ReadPosRankSum=1.332;SOR=0.654;VQSLOD=-1.202e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,11:16:99:400,0,200
+20	220092	rs6075009	C	A	312.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.153;CNN_1D=1.053;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=2.158;MLEAC=1;MLEAF=0.500;MQ=58.91;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;QD=20.85;ReadPosRankSum=1.969;SOR=0.588;VQSLOD=-9.500e-01;culprit=QD	GT:AD:DP:GQ:PL	0/1:6,9:15:99:341,0,233
+20	220197	rs4334551	C	T	392.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;CNN_1D=3.536;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=21.82;ReadPosRankSum=-1.068;SOR=0.627;VQSLOD=21.92;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,10:18:99:421,0,477
+20	220204	rs4535135	T	G	389.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.067;CNN_1D=3.278;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.49;ReadPosRankSum=-0.891;SOR=0.368;VQSLOD=22.29;culprit=QD	GT:AD:DP:GQ:PL	0/1:9,11:20:99:418,0,505
+20	220444	rs6080130	G	A	157.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.290;CNN_1D=1.532;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=4.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.86;ReadPosRankSum=-0.776;SOR=1.546;VQSLOD=22.84;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,7:16:99:186,0,205
+20	220716	rs35075857	C	CAAA	29.74	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;CNN_1D=-1.494;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.38;MQRankSum=0.000;QD=3.72;ReadPosRankSum=0.921;SOR=1.445;VQSLOD=5.85;culprit=QD	GT:AD:DP:GQ:PL	0/1:6,2:8:67:67,0,374
+20	220734	.	T	G	32.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.373;CNN_1D=-3.001;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.27;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;QD=2.98;ReadPosRankSum=-0.199;SOR=1.179;VQSLOD=-1.660e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,3:11:61:61,0,431
+20	221118	rs5839844	G	GA	22.75	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;CNN_1D=-2.257;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=4.55;ReadPosRankSum=0.000;SOR=0.446;VQSLOD=7.76;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,2:5:60:60,0,97
+20	221137	.	C	A	25.78	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;CNN_1D=-2.791;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.68;ReadPosRankSum=1.668;SOR=0.223;VQSLOD=20.41;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,2:7:54:54,0,155
+20	221942	rs2050980	G	A	264.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.923;CNN_1D=2.425;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.57;ReadPosRankSum=-0.987;SOR=0.859;VQSLOD=22.87;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,11:17:99:293,0,120
+20	222539	rs36035882	C	CA	345.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.722;CNN_1D=1.426;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=13.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=20.34;ReadPosRankSum=1.483;SOR=0.016;VQSLOD=3.68;culprit=FS	GT:AD:DP:GQ:PL	0/1:7,10:17:99:383,0,228
+20	222674	rs6043906	G	A	303.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=2.126;CNN_1D=2.805;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.51;MQRankSum=0.962;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=14.47;ReadPosRankSum=1.399;SOR=0.905;VQSLOD=-2.106e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:9,12:21:99:332,0,217
+20	222708	rs73060551	T	C	276.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.117;CNN_1D=0.811;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.84;ReadPosRankSum=0.914;SOR=0.368;VQSLOD=22.48;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,12:20:99:305,0,194
+20	222836	rs1978761	C	T	288.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.346;CNN_1D=2.986;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.04;ReadPosRankSum=-0.209;SOR=0.495;VQSLOD=22.93;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,11:18:99:317,0,191
+20	222994	rs2033588	A	C	122.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;CNN_1D=1.388;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=1.949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.85;ReadPosRankSum=-2.045;SOR=0.280;VQSLOD=22.16;culprit=MQ	GT:AD:DP:GQ:PL	0/1:14,7:21:99:151,0,376
+20	223172	rs4814488	T	C	287.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;CNN_1D=2.689;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.99;ReadPosRankSum=-0.622;SOR=0.293;VQSLOD=22.43;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,11:18:99:316,0,175
+20	223255	rs4239717	T	G	215.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.889;CNN_1D=2.543;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.27;ReadPosRankSum=0.333;SOR=0.593;VQSLOD=23.08;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,9:21:99:244,0,310
+20	223439	rs4814494	G	A	229.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;CNN_1D=2.655;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.49;ReadPosRankSum=0.669;SOR=0.412;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,10:20:99:258,0,267
+20	223538	rs4814496	T	C	259.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;CNN_1D=2.935;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.28;ReadPosRankSum=-0.220;SOR=0.399;VQSLOD=22.93;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,10:17:99:288,0,186
+20	223858	rs6075062	A	G	119.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.330;CNN_1D=2.344;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=4.786;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.65;ReadPosRankSum=1.803;SOR=0.565;VQSLOD=23.01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,7:18:99:148,0,296
+20	224128	rs16999397	T	C	220.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.276;CNN_1D=2.084;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.51;ReadPosRankSum=0.133;SOR=0.627;VQSLOD=23.08;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,11:21:99:249,0,222
+20	224173	rs4814505	C	T	232.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.292;CNN_1D=2.037;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.64;ReadPosRankSum=-0.865;SOR=1.112;VQSLOD=22.50;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,10:20:99:261,0,233
+20	224601	rs36080315	G	T	216.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;CNN_1D=3.394;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=21.68;ReadPosRankSum=-0.493;SOR=0.859;VQSLOD=21.75;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,8:10:40:245,0,40
+20	224745	rs57642611	GA	G	194.27	PASS	AC=2;AF=1.00;AN=2;BaseQRankSum=-0.385;CNN_1D=1.582;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.43;ReadPosRankSum=0.126;SOR=0.569;VQSLOD=7.70;culprit=MQRankSum	GT:AD:DP:GQ:PL	1/1:1,9:10:1:229,1,0
+20	224941	rs6075074	T	A	214.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;CNN_1D=3.255;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.52;ReadPosRankSum=0.000;SOR=1.402;VQSLOD=22.40;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,9:13:99:243,0,99
+20	224971	rs6080305	G	A	296.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.465;CNN_1D=3.203;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.55;ReadPosRankSum=-1.416;SOR=0.892;VQSLOD=22.28;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,11:16:99:325,0,121
+20	225058	rs10222024	A	G	185.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.771;CNN_1D=2.597;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.29;ReadPosRankSum=0.023;SOR=0.892;VQSLOD=22.81;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,9:13:99:214,0,102
+20	225412	rs11908080	T	C	259.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.236;CNN_1D=2.931;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.55;ReadPosRankSum=-1.073;SOR=0.760;VQSLOD=22.01;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,11:14:58:288,0,58
+20	225444	rs6075086	T	C	183.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;CNN_1D=3.876;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.38;ReadPosRankSum=0.000;SOR=0.223;VQSLOD=22.38;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,8:10:34:212,0,34
+20	225768	rs6080351	G	A	142.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.376;CNN_1D=2.183;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.98;ReadPosRankSum=-0.316;SOR=1.229;VQSLOD=22.33;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,6:13:99:171,0,168
+20	226084	rs376757841	GTATATATA	G	208.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;CNN_1D=-0.933;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.09;ReadPosRankSum=2.100;SOR=2.303;VQSLOD=3.94;culprit=ReadPosRankSum	GT:AD:DP:GQ:PL	0/1:2,6:8:99:246,0,159
+20	226444	rs438960	A	G	176.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.958;CNN_1D=1.497;ClippingRankSum=0.000;DB;DP=27;ExcessHet=3.0103;FS=13.359;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.80;ReadPosRankSum=1.748;SOR=0.714;VQSLOD=21.02;culprit=MQ	GT:AD:DP:GQ:PL	0/1:16,10:26:99:205,0,423
+20	226518	rs431766	G	A	141.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.652;CNN_1D=1.132;ClippingRankSum=0.000;DB;DP=25;ExcessHet=3.0103;FS=10.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.67;ReadPosRankSum=-0.125;SOR=0.866;VQSLOD=22.21;culprit=MQ	GT:AD:DP:GQ:PL	0/1:17,8:25:99:170,0,474
+20	226789	rs397007	T	A	51.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;CNN_1D=-0.042;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=2.88;ReadPosRankSum=1.239;SOR=0.892;VQSLOD=22.27;culprit=QD	GT:AD:DP:GQ:PL	0/1:14,4:18:80:80,0,416
+20	227024	rs73060564	G	A	246.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.136;CNN_1D=3.094;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.22;ReadPosRankSum=0.660;SOR=0.409;VQSLOD=22.51;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,11:22:99:275,0,282
+20	227142	rs377021	G	T	179.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;CNN_1D=1.699;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=7.025;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.56;ReadPosRankSum=0.000;SOR=1.215;VQSLOD=22.82;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,9:21:99:208,0,330
+20	227246	rs395435	A	G	154.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.262;CNN_1D=1.229;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.60;ReadPosRankSum=-1.111;SOR=0.859;VQSLOD=22.49;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,8:18:99:183,0,259
+20	227967	rs371791	G	A	301.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.247;CNN_1D=2.354;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.88;ReadPosRankSum=-1.330;SOR=1.609;VQSLOD=22.71;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,12:19:99:330,0,157
+20	228157	rs200598178	AAAGGAAGG	A	181.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;CNN_1D=-0.962;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.94;ReadPosRankSum=-0.524;SOR=0.693;VQSLOD=5.55;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:1,4:5:60:165,0,60
+20	228206	rs405054	A	C	127.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.405;CNN_1D=-0.842;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.97;ReadPosRankSum=-0.272;SOR=1.447;VQSLOD=21.78;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,4:8:99:156,0,176
+20	228577	rs1775904	G	A	150.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.089;CNN_1D=1.614;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=1.984;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.94;ReadPosRankSum=1.464;SOR=1.609;VQSLOD=22.94;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,7:19:99:179,0,332
+20	229456	rs580629	G	A	148.10	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.534;CNN_1D=1.602;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-0.157;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=18.51;ReadPosRankSum=-0.157;SOR=2.526;VQSLOD=-4.958e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:1,7:8:11:176,0,11
+20	229495	rs485058	T	C	180.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.832;CNN_1D=2.378;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.09;MQRankSum=0.048;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=12.91;ReadPosRankSum=1.539;SOR=1.002;VQSLOD=-4.198e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:5,9:14:99:209,0,119
+20	229978	rs448030	G	C	77.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.637;CNN_1D=1.179;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=7.202;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.78;ReadPosRankSum=-0.616;SOR=1.414;VQSLOD=22.51;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,4:10:99:106,0,170
+20	230053	rs55658058	C	T	132.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;CNN_1D=0.615;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=9.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=-0.319;SOR=2.209;VQSLOD=21.26;culprit=MQ	GT:AD:DP:GQ:PL	0/1:2,6:8:56:161,0,56
+20	230177	rs401906	A	T	183.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.485;CNN_1D=2.574;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.54;MQRankSum=1.327;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=9.19;ReadPosRankSum=-0.571;SOR=0.446;VQSLOD=0.346;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:12,8:20:99:212,0,322
+20	230516	rs406449	T	A	98.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.512;CNN_1D=1.405;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.05;ReadPosRankSum=-0.727;SOR=0.905;VQSLOD=22.87;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,5:14:99:127,0,260
+20	230541	rs392808	A	T	158.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.307;CNN_1D=1.935;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.34;ReadPosRankSum=-0.801;SOR=0.729;VQSLOD=23.02;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,7:17:99:187,0,273
+20	230859	rs434058	C	T	39.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.955;CNN_1D=-1.604;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=6.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=3.62;ReadPosRankSum=-0.718;SOR=2.833;VQSLOD=21.66;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,3:11:68:68,0,212
+20	230983	rs438305	C	T	221.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.479;CNN_1D=3.232;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=9.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.78;ReadPosRankSum=0.550;SOR=0.027;VQSLOD=21.94;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,10:15:94:250,0,94
+20	231090	rs544836	C	T	204.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;CNN_1D=2.024;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.38;ReadPosRankSum=0.178;SOR=0.758;VQSLOD=22.52;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,9:18:99:233,0,236
+20	231312	rs386387	A	C	190.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.321;CNN_1D=3.131;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.63;ReadPosRankSum=0.975;SOR=0.593;VQSLOD=22.32;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,8:14:99:219,0,161
+20	231505	rs451404	G	A	213.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=3.358;CNN_1D=2.201;ClippingRankSum=0.000;DB;DP=24;ExcessHet=3.0103;FS=1.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.29;ReadPosRankSum=0.044;SOR=0.715;VQSLOD=22.71;culprit=MQ	GT:AD:DP:GQ:PL	0/1:14,9:23:99:242,0,327
+20	232107	rs366968	G	C	297.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.545;CNN_1D=2.666;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=2.622;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.61;ReadPosRankSum=-0.888;SOR=1.981;VQSLOD=22.17;culprit=QD	GT:AD:DP:GQ:PL	0/1:5,11:16:87:326,0,87
+20	232580	rs415385	G	C	125.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.516;CNN_1D=1.846;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=4.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.38;ReadPosRankSum=0.197;SOR=0.132;VQSLOD=22.93;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,6:15:99:154,0,241
+20	233623	rs1774116	A	T	201.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.604;CNN_1D=4.046;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.45;ReadPosRankSum=1.426;SOR=0.078;VQSLOD=22.98;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,8:15:99:230,0,145
+20	233879	rs1774117	C	A	363.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.449;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.31;SOR=1.022;VQSLOD=21.22;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:392,36,0
+20	234179	rs12624793	A	G	73.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.046;CNN_1D=1.798;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.71;ReadPosRankSum=-0.718;SOR=0.495;VQSLOD=22.12;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,4:11:99:102,0,192
+20	234360	rs6080732	C	T	96.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.959;CNN_1D=1.503;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.69;ReadPosRankSum=-0.294;SOR=1.022;VQSLOD=22.41;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,6:17:99:125,0,243
+20	235107	rs416827	A	C	211.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.844;CNN_1D=0.181;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.76;ReadPosRankSum=-1.372;SOR=1.781;VQSLOD=22.29;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,9:18:99:240,0,209
+20	235722	rs1737886	G	A	100.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.637;CNN_1D=1.595;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=58.81;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=9.16;ReadPosRankSum=0.289;SOR=1.981;VQSLOD=0.080;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,5:11:99:129,0,139
+20	235997	rs58897153	C	CAAAAAAAA	40.73	PASS	AC=1;AF=0.500;AN=2;CNN_1D=-0.415;DB;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=20.37;SOR=0.693;VQSLOD=3.98;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,0:2:78:78,0,162
+20	236088	rs1737884	T	C	164.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.963;CNN_1D=2.509;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.98;ReadPosRankSum=0.728;SOR=0.859;VQSLOD=22.95;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,8:15:99:193,0,162
+20	236168	rs392400	T	C	112.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.847;CNN_1D=0.287;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=5.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.52;ReadPosRankSum=1.254;SOR=2.272;VQSLOD=22.91;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,6:15:99:141,0,265
+20	236238	rs451497	G	A	235.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.398;CNN_1D=2.706;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.79;ReadPosRankSum=-0.946;SOR=0.399;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,10:20:99:264,0,274
+20	236286	rs377053	A	G	290.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.731;CNN_1D=3.140;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.22;ReadPosRankSum=1.709;SOR=0.593;VQSLOD=22.47;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,12:22:99:319,0,277
+20	236328	rs374107	A	C	325.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;CNN_1D=2.125;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.51;ReadPosRankSum=0.000;SOR=0.551;VQSLOD=22.47;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,13:21:99:354,0,203
+20	236419	rs364544	G	A	173.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.731;CNN_1D=2.875;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.86;ReadPosRankSum=1.581;SOR=0.368;VQSLOD=22.92;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,8:16:99:202,0,199
+20	236459	.	G	GAT	120.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.923;CNN_1D=-1.455;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.77;MQRankSum=0.674;POSITIVE_TRAIN_SITE;QD=10.06;ReadPosRankSum=0.079;SOR=1.329;VQSLOD=3.74;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,6:12:99:158,0,156
+20	236992	rs434609	C	T	157.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.683;CNN_1D=2.343;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.52;ReadPosRankSum=0.320;SOR=0.941;VQSLOD=22.95;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,7:15:99:186,0,224
+20	237052	rs375084	G	C	219.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.076;CNN_1D=3.517;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.65;ReadPosRankSum=0.420;SOR=0.743;VQSLOD=22.33;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,9:15:99:248,0,141
+20	237418	rs376396	G	A	355.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;CNN_1D=3.651;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.79;ReadPosRankSum=1.526;SOR=0.700;VQSLOD=22.88;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,14:20:99:384,0,145
+20	237497	rs389018	A	G	480.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;CNN_1D=3.284;ClippingRankSum=0.000;DB;DP=24;ExcessHet=3.0103;FS=1.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=20.03;ReadPosRankSum=0.907;SOR=0.307;VQSLOD=22.75;culprit=QD	GT:AD:DP:GQ:PL	0/1:6,18:24:99:509,0,127
+20	237545	rs429072	C	T	545.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.988;CNN_1D=3.346;ClippingRankSum=0.000;DB;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=23.73;ReadPosRankSum=0.872;SOR=0.646;VQSLOD=22.31;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,15:23:99:574,0,281
+20	237569	rs369474	C	A	569.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.958;CNN_1D=2.546;ClippingRankSum=0.000;DB;DP=27;ExcessHet=3.0103;FS=1.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=21.10;ReadPosRankSum=0.272;SOR=0.832;VQSLOD=22.03;culprit=QD	GT:AD:DP:GQ:PL	0/1:11,16:27:99:598,0,378
+20	237618	rs365548	A	T	323.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.630;CNN_1D=0.565;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=8.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.45;ReadPosRankSum=-0.616;SOR=1.492;VQSLOD=22.74;culprit=MQ	GT:AD:DP:GQ:PL	0/1:13,13:26:99:352,0,339
+20	237649	rs10538684	CAGAT	C	406.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.788;CNN_1D=-0.543;ClippingRankSum=0.000;DB;DP=25;ExcessHet=3.0103;FS=6.701;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.68;ReadPosRankSum=-1.815;SOR=1.944;VQSLOD=6.35;culprit=ReadPosRankSum	GT:AD:DP:GQ:PL	0/1:11,12:23:99:444,0,417
+20	237677	rs6080864	T	C	534.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.318;CNN_1D=0.260;ClippingRankSum=0.000;DB;DP=27;ExcessHet=3.0103;FS=3.452;MLEAC=1;MLEAF=0.500;MQ=60.40;MQRankSum=0.905;NEGATIVE_TRAIN_SITE;QD=19.81;ReadPosRankSum=-0.568;SOR=1.164;VQSLOD=-6.691e-01;culprit=QD	GT:AD:DP:GQ:PL	0/1:11,16:27:99:563,0,405
+20	237816	rs11087230	A	AT	182.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.113;CNN_1D=-0.043;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=6.113;MLEAC=1;MLEAF=0.500;MQ=60.67;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.05;ReadPosRankSum=0.251;SOR=2.833;VQSLOD=6.09;culprit=SOR	GT:AD:DP:GQ:PL	0/1:6,8:14:99:220,0,155
+20	238020	rs446621	C	T	126.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;CNN_1D=2.197;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.46;ReadPosRankSum=0.400;SOR=0.586;VQSLOD=22.97;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,7:17:99:155,0,245
+20	238435	rs66489228	CTGGTCT	C	316.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.390;CNN_1D=0.618;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.63;ReadPosRankSum=1.513;SOR=0.836;VQSLOD=7.23;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:8,9:17:99:354,0,359
+20	238507	rs373225	A	C	305.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.035;CNN_1D=2.510;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.09;ReadPosRankSum=0.000;SOR=1.609;VQSLOD=22.73;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,12:19:99:334,0,155
+20	238530	rs412143	T	G	390.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.410;CNN_1D=3.421;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=1.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=22.99;ReadPosRankSum=0.503;SOR=1.270;VQSLOD=22.15;culprit=QD	GT:AD:DP:GQ:PL	0/1:6,11:17:99:419,0,212
+20	238540	rs416360	C	T	392.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.551;CNN_1D=3.565;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=21.82;ReadPosRankSum=0.738;SOR=0.627;VQSLOD=22.43;culprit=QD	GT:AD:DP:GQ:PL	0/1:7,11:18:99:421,0,244
+20	238737	rs409547	C	T	427.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.108;CNN_1D=2.477;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.45;ReadPosRankSum=-1.686;SOR=0.941;VQSLOD=22.80;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,16:26:99:456,0,265
+20	239294	rs419762	T	C	361.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.329;CNN_1D=3.704;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.49;MQRankSum=0.850;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=16.44;ReadPosRankSum=1.724;SOR=0.693;VQSLOD=0.229;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:8,14:22:99:390,0,200
+20	239408	.	A	ACTGTGAAGACCTGGTCCCCACCC	262.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;CNN_1D=0.954;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=62.65;MQRankSum=2.433;QD=18.77;ReadPosRankSum=-2.730;SOR=0.693;VQSLOD=2.33;culprit=ReadPosRankSum	GT:AD:DP:GQ:PL	0/1:8,6:14:99:300,0,2380
+20	239411	.	G	GTTTTTACCCA	252.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;CNN_1D=0.651;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=62.82;MQRankSum=2.232;POSITIVE_TRAIN_SITE;QD=16.85;ReadPosRankSum=-2.830;SOR=0.941;VQSLOD=3.60;culprit=ReadPosRankSum	GT:AD:DP:GQ:PL	0/1:8,7:15:99:290,0,2380
+20	239664	rs420525	T	C	192.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.211;CNN_1D=2.128;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=7.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.15;ReadPosRankSum=-0.521;SOR=0.895;VQSLOD=23.33;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,8:19:99:221,0,324
+20	239688	rs399083	G	A	364.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.567;CNN_1D=2.120;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=11.563;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.20;ReadPosRankSum=-1.938;SOR=1.421;VQSLOD=21.88;culprit=QD	GT:AD:DP:GQ:PL	0/1:9,10:19:99:393,0,526
+20	239697	rs399094	G	C	361.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.099;CNN_1D=2.428;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=7.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.09;ReadPosRankSum=-0.149;SOR=1.447;VQSLOD=23.26;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,10:20:99:390,0,548
+20	240704	rs427969	T	A	286.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;CNN_1D=2.270;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.12;ReadPosRankSum=-0.253;SOR=2.419;VQSLOD=22.26;culprit=QD	GT:AD:DP:GQ:PL	0/1:7,8:15:99:315,0,404
+20	240706	rs369103	T	A	286.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.752;CNN_1D=2.204;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=19.12;ReadPosRankSum=-0.253;SOR=2.419;VQSLOD=22.26;culprit=QD	GT:AD:DP:GQ:PL	0/1:7,8:15:99:315,0,404
+20	241234	rs374235	C	T	350.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.486;CNN_1D=3.298;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=15.94;ReadPosRankSum=0.091;SOR=0.446;VQSLOD=22.99;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,13:22:99:379,0,184
+20	241366	rs416096	G	A	195.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.873;CNN_1D=2.845;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=2.158;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.24;ReadPosRankSum=-2.142;SOR=0.169;VQSLOD=22.87;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,8:16:99:224,0,204
+20	241638	rs73060596	G	A	162.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;CNN_1D=2.303;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=4.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.04;ReadPosRankSum=0.411;SOR=0.916;VQSLOD=22.94;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,8:18:99:191,0,267
+20	242409	rs73060597	G	A	299.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.468;CNN_1D=3.287;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=2.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.63;ReadPosRankSum=2.556;SOR=1.802;VQSLOD=22.06;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,11:17:99:328,0,123
+20	242615	rs112784226	G	T	123.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.208;CNN_1D=2.317;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.84;ReadPosRankSum=1.426;SOR=0.804;VQSLOD=22.01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,6:14:99:152,0,220
+20	242685	rs513518	G	A	244.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.690;CNN_1D=2.848;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.48;ReadPosRankSum=-0.194;SOR=0.790;VQSLOD=21.75;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,7:14:99:273,0,306
+20	242694	rs6045353	T	C	244.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.545;CNN_1D=3.085;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=17.48;ReadPosRankSum=1.515;SOR=0.790;VQSLOD=22.06;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,7:14:99:273,0,306
+20	242798	rs112054708	C	T	53.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;CNN_1D=1.605;ClippingRankSum=0.000;DB;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=59.45;MQRankSum=0.566;NEGATIVE_TRAIN_SITE;QD=7.68;ReadPosRankSum=-0.652;SOR=0.916;VQSLOD=-7.404e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:4,3:7:67:82,0,67
+20	243223	rs11480346	C	CT	95.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.550;CNN_1D=-0.473;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=2.112;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.32;ReadPosRankSum=1.973;SOR=1.329;VQSLOD=6.85;culprit=QD	GT:AD:DP:GQ:PL	0/1:13,5:18:99:133,0,427
+20	243352	rs6045392	G	T	215.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;CNN_1D=3.229;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.49;ReadPosRankSum=-0.579;SOR=0.653;VQSLOD=22.99;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,9:16:99:244,0,161
+20	243398	rs6045395	G	C	214.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.953;CNN_1D=2.539;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.93;ReadPosRankSum=-1.187;SOR=0.693;VQSLOD=23.05;culprit=MQ	GT:AD:DP:GQ:PL	0/1:9,9:18:99:243,0,254
+20	243679	rs8123679	A	C	186.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.555;CNN_1D=2.951;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.37;ReadPosRankSum=-0.857;SOR=0.818;VQSLOD=22.22;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,8:13:99:215,0,112
+20	243924	rs6045425	C	A	258.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.990;CNN_1D=3.017;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.17;ReadPosRankSum=-0.239;SOR=1.085;VQSLOD=22.42;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,10:16:99:287,0,143
+20	244092	rs399379	C	G	179.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;CNN_1D=1.886;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.34;ReadPosRankSum=0.176;SOR=0.693;VQSLOD=22.54;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,7:11:98:208,0,98
+20	244120	.	G	GGT	172.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;CNN_1D=-0.089;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.19;ReadPosRankSum=0.623;SOR=0.693;VQSLOD=6.25;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:2,7:9:79:210,0,79
+20	244146	rs405543	C	T	210.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.406;CNN_1D=-2.252;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.16;ReadPosRankSum=0.481;SOR=1.773;VQSLOD=21.17;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,8:11:99:239,0,107
+20	244333	rs8125338	A	G	37.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.433;CNN_1D=0.209;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=2.70;ReadPosRankSum=-0.366;SOR=0.905;VQSLOD=22.36;culprit=QD	GT:AD:DP:GQ:PL	0/1:9,5:14:66:66,0,265
+20	244373	rs55816200	C	T	36.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.194;CNN_1D=0.966;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=3.06;ReadPosRankSum=-0.114;SOR=0.368;VQSLOD=21.94;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,4:12:65:65,0,145
+20	244985	rs73062403	G	A	171.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.084;CNN_1D=1.719;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=12.27;ReadPosRankSum=-1.113;SOR=0.593;VQSLOD=22.35;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,8:14:90:200,0,90
+20	245466	rs73065152	T	G	97.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.443;CNN_1D=1.644;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=4.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.98;ReadPosRankSum=0.000;SOR=0.595;VQSLOD=22.47;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,7:14:99:126,0,170
+20	245662	rs60871954	G	T	172.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.067;CNN_1D=-0.919;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=7.068;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.60;ReadPosRankSum=1.345;SOR=0.610;VQSLOD=21.28;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,5:8:99:201,0,232
+20	245665	.	T	G	172.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;CNN_1D=-1.517;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=7.068;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.60;ReadPosRankSum=1.068;SOR=0.610;VQSLOD=20.48;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,5:8:99:201,0,232
+20	245669	.	T	G	172.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;CNN_1D=-1.896;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.68;ReadPosRankSum=0.180;SOR=0.636;VQSLOD=20.03;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,5:7:99:201,0,232
+20	245673	.	T	G	133.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;CNN_1D=-1.517;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.29;ReadPosRankSum=-0.341;SOR=0.105;VQSLOD=20.20;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,4:6:99:162,0,181
+20	245690	rs6035095	C	T	151.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.668;CNN_1D=-2.124;ClippingRankSum=0.000;DB;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.68;ReadPosRankSum=-0.366;SOR=0.180;VQSLOD=20.95;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,5:7:99:180,0,178
+20	245935	rs6112057	G	T	156.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.938;CNN_1D=2.955;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.45;ReadPosRankSum=-0.293;SOR=1.022;VQSLOD=22.41;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,7:15:99:185,0,206
+20	246255	rs73065153	C	T	170.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.973;CNN_1D=2.335;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=11.38;ReadPosRankSum=-0.842;SOR=0.527;VQSLOD=22.41;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,7:15:99:199,0,208
+20	246483	rs142144494	T	TTAAA	190.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.307;CNN_1D=0.197;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=-1.218;SOR=0.976;VQSLOD=6.15;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:8,6:14:99:228,0,387
+20	251373	.	ACTT	A	205.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;CNN_1D=1.202;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=13.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=22.86;ReadPosRankSum=0.241;SOR=2.204;VQSLOD=5.15;culprit=FS	GT:AD:DP:GQ:PL	0/1:3,6:9:99:243,0,129
+20	252084	rs71327435	TACAC	T	245.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.252;CNN_1D=-0.511;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=2.027;MLEAC=1;MLEAF=0.500;MQ=60.63;MQRankSum=0.566;POSITIVE_TRAIN_SITE;QD=17.55;ReadPosRankSum=0.437;SOR=0.307;VQSLOD=1.72;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,8:14:99:283,0,251
+20	259818	rs6035541	G	A	95.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.004;CNN_1D=-0.159;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.99;ReadPosRankSum=-2.183;SOR=0.883;VQSLOD=22.55;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,6:16:99:124,0,271
+20	267231	rs147067453	G	GAAAAGA	100.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;CNN_1D=-1.280;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-1.368;SOR=0.916;VQSLOD=5.81;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:4,3:7:99:138,0,279
+20	271135	rs3215551	G	GC	447.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.874;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=34.44;SOR=0.836;VQSLOD=6.55;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,13:13:39:485,39,0
+20	272593	rs6075793	A	G	731.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.904;DB;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.27;SOR=1.358;VQSLOD=21.13;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,25:25:74:760,74,0
+20	277617	rs3827154	C	T	406.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.159;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.29;SOR=1.179;VQSLOD=22.15;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:435,39,0
+20	277692	rs3746790	C	G	440.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.779;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.48;SOR=1.329;VQSLOD=21.70;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:42:469,42,0
+20	277832	rs1997793	C	T	515.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.795;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.34;SOR=1.371;VQSLOD=21.66;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:544,51,0
+20	278515	rs2223665	T	C	628.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.455;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.94;SOR=1.508;VQSLOD=22.42;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,21:21:63:657,63,0
+20	278687	rs5839847	CCGG	C	412.74	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.506;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.69;SOR=1.609;VQSLOD=6.82;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,10:10:30:450,30,0
+20	279185	rs45569040	C	T	89.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;CNN_1D=0.687;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.28;ReadPosRankSum=0.059;SOR=1.022;VQSLOD=22.40;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,5:17:99:118,0,344
+20	283535	rs2143528	A	G	343.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.047;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.65;SOR=0.693;VQSLOD=22.11;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:372,36,0
+20	283877	rs4815112	T	C	633.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.998;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.81;SOR=0.874;VQSLOD=21.85;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,22:22:66:662,66,0
+20	284048	rs6082712	C	A	398.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.199;CNN_1D=2.830;ClippingRankSum=0.000;DB;DP=27;ExcessHet=3.0103;FS=3.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.77;ReadPosRankSum=-0.305;SOR=0.669;VQSLOD=22.65;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,16:27:99:427,0,257
+20	284074	rs6036130	A	G	240.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.515;CNN_1D=2.617;ClippingRankSum=0.000;DB;DP=22;ExcessHet=3.0103;FS=4.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.94;ReadPosRankSum=-1.571;SOR=0.819;VQSLOD=23.17;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,10:22:99:269,0,345
+20	284755	rs6082745	C	G	141.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.252;CNN_1D=1.762;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.13;ReadPosRankSum=0.170;SOR=1.270;VQSLOD=22.85;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,7:14:99:170,0,171
+20	284814	rs6082746	T	C	492.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.443;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.99;SOR=0.804;VQSLOD=21.86;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,17:17:51:521,51,0
+20	284901	rs11699144	C	T	111.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.756;CNN_1D=2.393;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.98;ReadPosRankSum=0.736;SOR=0.169;VQSLOD=22.20;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,6:14:99:140,0,225
+20	285009	rs12185783	G	C	219.84	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.277;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.51;POSITIVE_TRAIN_SITE;QD=33.53;SOR=1.329;VQSLOD=4.79;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,6:6:18:248,18,0
+20	285020	rs11087390	G	A	251.80	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.081;DB;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.58;POSITIVE_TRAIN_SITE;QD=34.01;SOR=0.941;VQSLOD=4.11;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,7:7:21:280,21,0
+20	285094	rs12185771	T	C	158.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;CNN_1D=2.667;ClippingRankSum=0.000;DB;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.58;MQRankSum=-0.366;NEGATIVE_TRAIN_SITE;QD=22.68;ReadPosRankSum=-1.981;SOR=1.022;VQSLOD=-1.617e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,5:7:69:187,0,69
+20	285104	rs185660080	T	C	158.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;CNN_1D=2.960;ClippingRankSum=0.000;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.431;NEGATIVE_TRAIN_SITE;QD=26.46;ReadPosRankSum=-1.834;SOR=0.693;VQSLOD=-1.914e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:2,4:6:69:187,0,69
+20	285105	rs188805760	T	C	133.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;CNN_1D=3.115;ClippingRankSum=0.000;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.431;NEGATIVE_TRAIN_SITE;QD=22.29;ReadPosRankSum=-1.834;SOR=0.693;VQSLOD=-1.477e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,4:6:72:162,0,72
+20	285107	rs180782035	A	T	133.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;CNN_1D=2.465;ClippingRankSum=0.000;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.431;NEGATIVE_TRAIN_SITE;QD=22.29;ReadPosRankSum=-1.834;SOR=0.693;VQSLOD=-1.483e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:2,4:6:72:162,0,72
+20	285148	rs36104738	CA	C	18.79	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;CNN_1D=-1.371;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.13;ReadPosRankSum=1.282;SOR=0.693;VQSLOD=6.09;culprit=QD	GT:AD:DP:GQ:PL	0/1:3,3:6:54:56,0,54
+20	285349	rs11087392	G	C	242.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.527;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.98;SOR=0.892;VQSLOD=20.39;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:271,27,0
+20	285656	rs11087393	A	T	273.78	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.330;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.42;SOR=2.093;VQSLOD=20.31;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,9:9:27:302,27,0
+20	286028	rs6082786	G	A	238.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.596;CNN_1D=2.306;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.92;ReadPosRankSum=-1.037;SOR=0.842;VQSLOD=22.67;culprit=MQ	GT:AD:DP:GQ:PL	0/1:6,10:16:99:267,0,126
+20	286047	rs6082788	A	C	546.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.100;DB;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.38;SOR=0.914;VQSLOD=19.54;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:575,54,0
+20	286487	rs4815138	G	A	226.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.770;CNN_1D=2.484;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.34;ReadPosRankSum=0.807;SOR=1.426;VQSLOD=22.37;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,9:17:99:255,0,192
+20	286515	rs4815139	T	C	724.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.021;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=26.46;SOR=1.061;VQSLOD=20.49;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,17:17:51:753,51,0
+20	286526	rs4815140	C	A	691.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.554;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=27.02;SOR=1.244;VQSLOD=21.01;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:720,48,0
+20	286587	rs4815141	G	A	393.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.684;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.13;SOR=0.693;VQSLOD=20.29;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:42:422,42,0
+20	286648	rs143938063	TAAATA	T	106.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.017;CNN_1D=0.832;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.89;ReadPosRankSum=1.517;SOR=0.551;VQSLOD=6.26;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:8,4:12:99:144,0,294
+20	286838	rs6082812	A	C	298.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.663;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.88;SOR=1.609;VQSLOD=22.05;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,10:10:30:327,30,0
+20	286876	rs11388037	C	CT	62.74	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.668;CNN_1D=0.135;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.96;ReadPosRankSum=-1.068;SOR=0.180;VQSLOD=7.76;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:2,5:7:28:100,0,28
+20	287226	rs140420198	A	G	157.74	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;CNN_1D=3.967;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=1.593;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=17.53;ReadPosRankSum=1.221;SOR=0.916;VQSLOD=-4.597e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:1,8:9:6:185,0,6
+20	287271	rs11697952	T	G	81.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.414;CNN_1D=-0.404;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=-0.887;NEGATIVE_TRAIN_SITE;QD=10.22;ReadPosRankSum=1.292;SOR=2.783;VQSLOD=-8.346e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:5,3:8:99:110,0,143
+20	287286	rs2873204	T	C	212.84	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.445;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.45;QD=29.42;SOR=1.981;VQSLOD=3.73;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,5:5:18:241,18,0
+20	287297	rs2316542	C	T	130.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;CNN_1D=2.599;ClippingRankSum=0.000;DB;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=58.68;MQRankSum=-0.566;NEGATIVE_TRAIN_SITE;QD=18.68;ReadPosRankSum=0.328;SOR=2.494;VQSLOD=-1.676e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:3,4:7:99:159,0,114
+20	287311	rs2873205	T	C	152.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.345;CNN_1D=2.558;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.84;MQRankSum=-0.489;NEGATIVE_TRAIN_SITE;QD=19.10;ReadPosRankSum=-0.489;SOR=1.329;VQSLOD=-1.376e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:3,5:8:99:181,0,111
+20	287529	rs2316543	T	C	300.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=-0.089;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.08;SOR=0.693;VQSLOD=21.23;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,10:10:30:329,30,0
+20	287637	rs2316544	G	C	445.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.999;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.84;SOR=1.765;VQSLOD=20.79;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,14:14:42:474,42,0
+20	288233	rs6075980	G	A	318.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.705;CNN_1D=2.851;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.78;ReadPosRankSum=-1.082;SOR=0.136;VQSLOD=23.10;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,12:19:99:347,0,152
+20	288356	rs59732461	CA	C	158.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.285;CNN_1D=0.877;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=6.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=0.778;SOR=0.061;VQSLOD=5.03;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:3,8:11:53:196,0,53
+20	288772	rs34607347	C	A	120.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.154;CNN_1D=0.737;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=1.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.10;ReadPosRankSum=-0.062;SOR=0.330;VQSLOD=22.31;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,6:17:99:149,0,310
+20	288776	rs4815163	T	C	562.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.435;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.13;SOR=0.941;VQSLOD=21.33;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:591,48,0
+20	288905	rs62191394	G	A	75.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.381;CNN_1D=0.903;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=4.74;ReadPosRankSum=0.855;SOR=0.693;VQSLOD=22.52;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,6:16:99:104,0,259
+20	288922	rs6075996	G	A	392.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.341;DB;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.21;SOR=0.836;VQSLOD=21.91;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,13:13:39:421,39,0
+20	288996	rs6082956	T	C	201.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.773;CNN_1D=2.298;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=2.081;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=13.45;ReadPosRankSum=-1.111;SOR=1.061;VQSLOD=22.91;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,8:15:99:230,0,167
+20	289362	rs723477	G	A	351.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.519;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.31;SOR=1.445;VQSLOD=21.63;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:380,36,0
+20	289612	rs6082985	G	C	493.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.721;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.86;SOR=1.244;VQSLOD=22.39;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:522,48,0
+20	289785	rs4813476	A	G	132.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.091;CNN_1D=2.466;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=7.81;ReadPosRankSum=1.307;SOR=0.729;VQSLOD=22.96;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,7:17:99:161,0,252
+20	290318	rs1028392	T	C	700.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.574;DB;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=31.85;SOR=1.085;VQSLOD=22.39;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,22:22:66:729,66,0
+20	291164	.	CGA	C	235.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.929;CNN_1D=1.236;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.206;SOR=0.495;VQSLOD=6.36;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,6:13:99:273,0,532
+20	291167	.	T	TCG	235.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.122;CNN_1D=1.271;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.275;SOR=0.495;VQSLOD=6.36;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,6:13:99:273,0,532
+20	291751	rs2235737	C	G	119.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.703;CNN_1D=2.801;ClippingRankSum=0.000;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.97;ReadPosRankSum=-0.921;SOR=0.799;VQSLOD=22.44;culprit=MQ	GT:AD:DP:GQ:PL	0/1:3,5:8:77:148,0,77
+20	291789	rs2235738	T	G	72.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.264;CNN_1D=1.012;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.09;ReadPosRankSum=0.241;SOR=1.981;VQSLOD=22.16;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,5:9:99:101,0,106
+20	291881	rs6048655	C	T	76.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;CNN_1D=0.828;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=6.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=6.40;ReadPosRankSum=-0.032;SOR=1.872;VQSLOD=22.70;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,5:12:99:105,0,162
+20	292327	rs6076049	T	C	249.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.474;CNN_1D=0.641;ClippingRankSum=0.000;DB;DP=26;ExcessHet=3.0103;FS=9.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=9.99;ReadPosRankSum=0.272;SOR=1.901;VQSLOD=21.93;culprit=MQ	GT:AD:DP:GQ:PL	0/1:13,12:25:99:278,0,353
+20	292418	rs6076050	T	C	707.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.851;DB;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.29;SOR=1.493;VQSLOD=20.89;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,18:18:54:736,54,0
+20	292435	rs6048715	G	T	698.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.833;DB;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.739;VQSLOD=21.36;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,17:17:51:727,51,0
+20	299498	rs6049343	C	G	206.80	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.344;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=29.54;SOR=0.941;VQSLOD=21.40;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,7:7:21:235,21,0
+20	299585	rs139222772	AC	A	187.87	PASS	AC=2;AF=1.00;AN=2;CNN_1D=0.268;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.981;VQSLOD=5.47;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,5:5:15:225,15,0
+20	299587	rs62191420	C	A	196.90	PASS	AC=2;AF=1.00;AN=2;CNN_1D=2.786;DB;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=1.981;VQSLOD=18.32;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,5:5:15:225,15,0
+20	299615	rs6138192	C	T	198.79	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.075;DB;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=24.85;SOR=1.863;VQSLOD=20.12;culprit=QD	GT:AD:DP:GQ:PL	1/1:0,8:8:23:227,23,0
+20	299759	rs6132693	G	T	335.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.029;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=27.98;SOR=0.693;VQSLOD=20.70;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,12:12:36:364,36,0
+20	300267	rs145397017	G	C	131.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.866;CNN_1D=-0.070;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.78;ReadPosRankSum=0.056;SOR=0.941;VQSLOD=22.07;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,7:15:99:160,0,223
+20	300277	rs5839852	CCA	C	124.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;CNN_1D=-0.399;ClippingRankSum=0.000;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.91;ReadPosRankSum=0.063;SOR=0.790;VQSLOD=7.82;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,7:14:99:162,0,167
+20	300482	rs73071017	G	A	162.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.210;CNN_1D=2.457;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.57;ReadPosRankSum=0.267;SOR=0.971;VQSLOD=22.91;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,8:19:99:191,0,281
+20	301894	rs6114578	A	G	118.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.275;CNN_1D=1.736;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=-0.431;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=13.20;ReadPosRankSum=-0.531;SOR=0.061;VQSLOD=-3.364e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:3,6:9:70:147,0,70
+20	304814	.	A	C	20.80	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.400;CNN_1D=-6.337;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=22.304;MLEAC=1;MLEAF=0.500;MQ=59.01;MQRankSum=-2.006;NEGATIVE_TRAIN_SITE;QD=1.22;ReadPosRankSum=-0.508;SOR=2.774;VQSLOD=-6.190e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:14,3:17:49:49,0,750
+20	304817	.	A	C	56.77	VQSRTrancheSNP99.90to100.00	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.677;CNN_1D=-3.445;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=16.580;MLEAC=1;MLEAF=0.500;MQ=58.95;MQRankSum=-1.273;NEGATIVE_TRAIN_SITE;QD=3.78;ReadPosRankSum=-2.046;SOR=0.580;VQSLOD=-4.404e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:10,5:15:85:85,0,133
+20	304823	.	A	C	11.12	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.271;CNN_1D=-6.348;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=16.564;MLEAC=1;MLEAF=0.500;MQ=59.01;MQRankSum=-2.556;QD=0.65;ReadPosRankSum=-1.253;SOR=2.199;VQSLOD=-4.108e+00;culprit=QD	GT:AD:DP:GQ:PL	0/1:15,2:17:39:39,0,794
+20	304837	.	G	C	11.12	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.988;CNN_1D=-4.832;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=9.031;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=0.69;ReadPosRankSum=-1.848;SOR=1.391;VQSLOD=20.72;culprit=QD	GT:AD:DP:GQ:PL	0/1:15,1:16:39:39,0,800
+20	306733	rs73071018	G	A	185.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.135;CNN_1D=2.341;ClippingRankSum=0.000;DB;DP=18;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=10.32;ReadPosRankSum=0.000;SOR=1.179;VQSLOD=22.51;culprit=MQ	GT:AD:DP:GQ:PL	0/1:10,8:18:99:214,0,267
+20	316844	rs201799930	CTCT	C,CTCTTCTTCT	243.73	PASS	AC=1,1;AF=0.500,0.500;AN=2;CNN_1D=-0.036;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.47;SOR=1.179;VQSLOD=6.41;culprit=FS	GT:AD:DP:GQ:PL	1/2:0,5,3:8:99:281,126,111,167,0,182
+20	319221	.	A	ATG	63.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.537;CNN_1D=-1.299;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.90;ReadPosRankSum=1.930;SOR=0.799;VQSLOD=5.49;culprit=QD	GT:AD:DP:GQ:PL	0/1:8,5:13:99:101,0,189
+20	321407	rs1008223	C	T	239.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.062;CNN_1D=2.592;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=6.640;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=18.44;ReadPosRankSum=-0.736;SOR=1.996;VQSLOD=22.32;culprit=QD	GT:AD:DP:GQ:PL	0/1:4,9:13:94:268,0,94
+20	322612	rs6051321	T	C	69.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.788;CNN_1D=1.575;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=5.37;ReadPosRankSum=0.502;SOR=0.283;VQSLOD=22.64;culprit=MQ	GT:AD:DP:GQ:PL	0/1:8,5:13:98:98,0,224
+20	333463	rs6115682	G	A	839.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=3.908;DB;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=28.96;SOR=0.906;VQSLOD=20.95;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,29:29:86:868,86,0
+20	334317	rs5839855	TC	T	632.73	PASS	AC=2;AF=1.00;AN=2;CNN_1D=1.471;DB;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.13;SOR=1.230;VQSLOD=5.79;culprit=FS	GT:AD:DP:GQ:PL	1/1:0,21:21:63:670,63,0
+20	336986	rs11288146	CA	C	53.19	PASS	AC=2;AF=1.00;AN=2;BaseQRankSum=-0.253;CNN_1D=-1.878;ClippingRankSum=0.000;DB;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.74;MQRankSum=-0.253;POSITIVE_TRAIN_SITE;QD=10.64;ReadPosRankSum=1.282;SOR=0.223;VQSLOD=3.47;culprit=MQRankSum	GT:AD:DP:GQ:PL	1/1:1,4:5:4:89,4,0
+20	337392	rs144627018	ACC	A	320.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.968;CNN_1D=1.108;ClippingRankSum=0.000;DB;DP=17;ExcessHet=3.0103;FS=2.158;MLEAC=1;MLEAF=0.500;MQ=60.63;MQRankSum=0.524;POSITIVE_TRAIN_SITE;QD=21.38;ReadPosRankSum=0.945;SOR=0.588;VQSLOD=1.54;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,9:15:99:358,0,222
+20	337568	rs62191429	C	G	484.77	PASS	AC=2;AF=1.00;AN=2;CNN_1D=4.144;DB;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;POSITIVE_TRAIN_SITE;QD=30.30;SOR=0.693;VQSLOD=20.81;culprit=MQ	GT:AD:DP:GQ:PL	1/1:0,16:16:48:513,48,0
+20	339223	.	CTTTTTT	C	70.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;CNN_1D=-2.459;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-0.842;SOR=0.991;VQSLOD=6.24;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:3,3:6:99:108,0,101
+20	339485	rs62191430	A	G	51.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.057;CNN_1D=1.757;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=3.70;ReadPosRankSum=-0.599;SOR=0.804;VQSLOD=22.22;culprit=QD	GT:AD:DP:GQ:PL	0/1:9,5:14:80:80,0,244
+20	340044	rs142345508	GCAC	G	175.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=0.183;CNN_1D=0.647;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.25;ReadPosRankSum=0.615;SOR=0.804;VQSLOD=6.38;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:13,6:19:99:213,0,622
+20	340513	rs12480478	T	G	242.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.289;CNN_1D=1.197;ClippingRankSum=0.000;DB;DP=19;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=58.01;MQRankSum=-1.673;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=12.78;ReadPosRankSum=0.701;SOR=1.371;VQSLOD=-7.136e-01;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:9,10:19:99:271,0,209
+20	340557	rs144663078	G	C	247.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.620;CNN_1D=1.836;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-0.731;NEGATIVE_TRAIN_SITE;QD=19.06;ReadPosRankSum=-0.275;SOR=1.688;VQSLOD=-1.821e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,7:13:99:276,0,395
+20	340558	rs139492682	G	T	247.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.595;CNN_1D=1.845;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-0.731;NEGATIVE_TRAIN_SITE;QD=19.06;ReadPosRankSum=-0.275;SOR=1.688;VQSLOD=-1.821e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,7:13:99:276,0,395
+20	340560	rs141886811	G	T	247.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.655;CNN_1D=1.797;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-0.731;NEGATIVE_TRAIN_SITE;QD=19.06;ReadPosRankSum=-0.552;SOR=1.688;VQSLOD=-1.827e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,7:13:99:276,0,395
+20	340568	rs12481076	G	A	247.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=2.137;CNN_1D=1.720;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-0.731;NEGATIVE_TRAIN_SITE;QD=19.06;ReadPosRankSum=-0.691;SOR=1.688;VQSLOD=-1.831e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,7:13:99:276,0,395
+20	340574	rs12479705	C	A	244.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=2.830;CNN_1D=1.621;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=2.246;MLEAC=1;MLEAF=0.500;MQ=56.02;MQRankSum=-0.886;NEGATIVE_TRAIN_SITE;QD=17.48;ReadPosRankSum=-0.309;SOR=1.402;VQSLOD=-1.509e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,7:14:99:273,0,437
+20	340575	rs12481077	G	A	244.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;CNN_1D=2.040;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-1.065;NEGATIVE_TRAIN_SITE;QD=18.83;ReadPosRankSum=0.275;SOR=1.179;VQSLOD=-1.709e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,6:13:99:273,0,437
+20	340591	rs12479706	C	T	121.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.608;CNN_1D=0.501;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.35;MQRankSum=-1.431;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=12.18;ReadPosRankSum=-0.204;SOR=0.892;VQSLOD=-1.413e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,4:10:99:150,0,369
+20	340596	.	TTG	T	112.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.316;CNN_1D=-1.050;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.35;MQRankSum=-1.431;QD=11.27;ReadPosRankSum=-0.816;SOR=0.892;VQSLOD=1.25;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,4:10:99:150,0,369
+20	340599	.	C	CAT	112.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.074;CNN_1D=-0.545;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.35;MQRankSum=-1.431;QD=11.27;ReadPosRankSum=-0.816;SOR=0.892;VQSLOD=1.69;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:6,4:10:99:150,0,369
+20	340604	rs12479714	C	T	118.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.795;CNN_1D=-0.259;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.89;MQRankSum=-1.589;NEGATIVE_TRAIN_SITE;QD=10.80;ReadPosRankSum=-0.361;SOR=1.270;VQSLOD=-1.638e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,4:11:99:147,0,411
+20	340613	rs12479715	C	A	76.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.648;CNN_1D=-1.020;ClippingRankSum=0.000;DB;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.35;MQRankSum=-2.037;NEGATIVE_TRAIN_SITE;QD=7.68;ReadPosRankSum=-0.536;SOR=0.892;VQSLOD=-1.805e+00;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:7,3:10:99:105,0,414
+20	341198	rs2004952	T	C	161.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=1.122;CNN_1D=1.872;ClippingRankSum=0.000;DB;DP=15;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=58.47;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=12.44;ReadPosRankSum=-0.066;SOR=1.911;VQSLOD=-5.201e-01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,6:13:99:190,0,291
+20	341200	rs2004951	T	C	161.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;CNN_1D=2.452;ClippingRankSum=0.000;DB;DP=14;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=58.35;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;QD=13.48;ReadPosRankSum=0.614;SOR=1.609;VQSLOD=-8.471e-01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:7,5:12:99:190,0,291
+20	341266	rs2003699	A	G	146.77	VQSRTrancheSNP99.00to99.90	AC=1;AF=0.500;AN=2;BaseQRankSum=0.418;CNN_1D=2.964;ClippingRankSum=0.000;DB;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.08;MQRankSum=0.000;NEGATIVE_TRAIN_SITE;POSITIVE_TRAIN_SITE;QD=14.68;ReadPosRankSum=0.842;SOR=1.329;VQSLOD=-6.224e-01;culprit=MQ	GT:AD:DP:GQ:PL	0/1:4,6:10:99:175,0,102
+20	341946	rs12480543	A	G	192.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.488;CNN_1D=1.654;ClippingRankSum=0.000;DB;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.03;ReadPosRankSum=-0.649;SOR=0.714;VQSLOD=22.96;culprit=MQ	GT:AD:DP:GQ:PL	0/1:13,11:24:99:221,0,312
+20	342695	rs6107205	A	G	180.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.352;CNN_1D=3.649;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.43;ReadPosRankSum=1.876;SOR=0.446;VQSLOD=21.62;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,6:11:99:209,0,272
+20	342696	rs6115714	T	C	180.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-1.063;CNN_1D=3.508;ClippingRankSum=0.000;DB;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=16.43;ReadPosRankSum=1.876;SOR=0.446;VQSLOD=21.98;culprit=MQ	GT:AD:DP:GQ:PL	0/1:5,6:11:99:209,0,272
+20	343323	rs11473148	A	ATG	278.73	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=1.400;CNN_1D=1.491;ClippingRankSum=0.000;DB;DP=13;ExcessHet=3.0103;FS=5.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.44;ReadPosRankSum=1.454;SOR=1.793;VQSLOD=5.16;culprit=MQRankSum	GT:AD:DP:GQ:PL	0/1:5,8:13:99:316,0,183
+20	343647	rs12481411	T	C	224.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-2.034;CNN_1D=1.357;ClippingRankSum=0.000;DB;DP=28;ExcessHet=3.0103;FS=3.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=8.64;ReadPosRankSum=-0.764;SOR=0.188;VQSLOD=22.09;culprit=MQ	GT:AD:DP:GQ:PL	0/1:14,12:26:99:253,0,358
+20	343758	rs7271406	A	G	313.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=-0.036;CNN_1D=3.084;ClippingRankSum=0.000;DB;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;POSITIVE_TRAIN_SITE;QD=14.94;ReadPosRankSum=-0.259;SOR=0.892;VQSLOD=22.47;culprit=MQ	GT:AD:DP:GQ:PL	0/1:12,9:21:99:342,0,623
+20	343763	rs12479803	G	A	316.77	PASS	AC=1;AF=0.500;AN=2;BaseQRankSum=2.073;CNN_1D=4.122;ClippingRankSum=0.000;DB;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=.;MQRankSum=.;POSITIVE_TRAIN_SITE;QD=.;ReadPosRankSum=.;SOR=.;VQSLOD=.;culprit=MQ	GT:AD:DP:GQ:PL	0/1:11,9:20:99:345,0,592