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VariantAnnotator ... but this is due to an old syntax update perhaps other docs in other tools are also affected.
The argument --resource example(s) show a wrong syntax in regards to the location of the "provider" name
--resource
Google 'GATK VariantAnnotator'; the first or one of the first hits points to the current GATK doc on the tool.
The example should read --resource:foo resource-file.vcf.gz
--resource:foo resource-file.vcf.gz
The example reads --resource foo:resource-file.vcf.gz
--resource foo:resource-file.vcf.gz
The text was updated successfully, but these errors were encountered:
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Bug Report
Affected tool(s) or class(es)
VariantAnnotator ... but this is due to an old syntax update perhaps other docs in other tools are also affected.
Affected version(s)
Description
The argument
--resourceexample(s) show a wrong syntax in regards to the location of the "provider" nameSteps to reproduce
Google 'GATK VariantAnnotator'; the first or one of the first hits points to the current GATK doc on the tool.
Expected behavior
The example should read
--resource:foo resource-file.vcf.gzActual behavior
The example reads
--resource foo:resource-file.vcf.gzThe text was updated successfully, but these errors were encountered: