NAMESPACE

# Generated by roxygen2: do not edit by hand

export(diff_limma)
export(getContactRegion)
export(getExpandedClone)
export(getGeneUsage)
export(getPseudobulk)
export(getUnqKmers)
export(plot_heatmap)
export(prepare_immunarch_by_celltype)
export(split_to_unq_kmers)
export(treecor_GO)
export(treecor_diversity_diff)
export(treecor_expandedclone_diff)
export(treecor_kmer)
export(treecor_vdj_diff)
export(treecortreatplot_v2)
import(RColorBrewer)
import(TreeCorTreat)
import(dplyr)
import(ggplot2)
import(ggraph)
import(immunarch)
import(limma)
import(mgcv)
import(org.Hs.eg.db)
import(parallel)
import(patchwork)
import(pheatmap)
import(tidyr)
import(topGO)
importFrom(Matrix,Matrix)
importFrom(Matrix,colSums)
importFrom(Matrix,t)
importFrom(compositions,clr)
importFrom(data.table,data.table)
importFrom(dplyr,as_tibble)
importFrom(ggrepel,geom_label_repel)
importFrom(igraph,graph_from_data_frame)
importFrom(lmtest,lrtest)
importFrom(stringr,str_sub)
importFrom(tidyr,gather)
importFrom(tidyr,spread)