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[FEATURE REQUEST] Effective bait depth #38

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campanam opened this issue Sep 8, 2021 · 0 comments
Open

[FEATURE REQUEST] Effective bait depth #38

campanam opened this issue Sep 8, 2021 · 0 comments

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@campanam
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campanam commented Sep 8, 2021

Feature request description
The log only provides the total bait depth after filtration (number of baits/number of targets or bp length). A more useful additional statistic would be effective depth (number of baits/number of retained targets or retained bp length). The effective depth would exclude any targets that ended up with 0 baits and thus mathematically would be >= total depth when retained targets != 0.

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