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Keiran Raine edited this page Mar 19, 2018
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You need to construct archives emulating the following (the first element of the path within the archive is dropped in all cases):
For mapping:
ftp://ftp.sanger.ac.uk/pub/cancer/dockstore/human/core_ref_GRCh37d5.tar.gz
ftp://ftp.sanger.ac.uk/pub/cancer/dockstore/human/bwa_idx_GRCh37d5.tar.gz