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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(list_plot_types)
export(make_chevreul_clean_names)
export(minimalChevreulApp)
export(unite_metadata)
import(SingleCellExperiment)
import(SummarizedExperiment)
import(chevreulPlot)
import(chevreulProcess)
import(dplyr)
import(ggplot2)
import(shiny)
import(stringr)
import(tidyr)
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,HeatmapAnnotation)
importFrom(ComplexHeatmap,draw)
importFrom(DBI,dbAppendTable)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbReadTable)
importFrom(DBI,dbWriteTable)
importFrom(DT,DTOutput)
importFrom(DT,datatable)
importFrom(DT,formatStyle)
importFrom(DT,renderDT)
importFrom(DataEditR,dataEditServer)
importFrom(DataEditR,dataEditUI)
importFrom(DataEditR,dataFilterServer)
importFrom(DataEditR,dataFilterUI)
importFrom(DataEditR,dataOutputServer)
importFrom(DataEditR,dataOutputUI)
importFrom(DataEditR,dataSelectServer)
importFrom(DataEditR,dataSelectUI)
importFrom(EnhancedVolcano,EnhancedVolcano)
importFrom(RSQLite,SQLite)
importFrom(S4Vectors,metadata)
importFrom(alabaster.base,readObject)
importFrom(alabaster.base,saveObject)
importFrom(chevreuldata,human_gene_transcript_sce)
importFrom(clustree,clustree)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,select)
importFrom(fs,dir_ls)
importFrom(fs,path)
importFrom(fs,path_dir)
importFrom(fs,path_file)
importFrom(future,plan)
importFrom(ggplotify,as.ggplot)
importFrom(ggpubr,theme_pubr)
importFrom(glue,glue)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(methods,is)
importFrom(plotly,event_data)
importFrom(plotly,ggplotly)
importFrom(plotly,partial_bundle)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(plotly,style)
importFrom(plotly,toWebGL)
importFrom(purrr,flatten_chr)
importFrom(purrr,map)
importFrom(purrr,map_chr)
importFrom(rappdirs,user_cache_dir)
importFrom(readr,read_csv)
importFrom(scran,findMarkers)
importFrom(shiny,incProgress)
importFrom(shiny,selectInput)
importFrom(shiny,withProgress)
importFrom(shinyFiles,getVolumes)
importFrom(shinyFiles,parseFilePaths)
importFrom(shinyFiles,parseSavePath)
importFrom(shinyFiles,shinyFileChoose)
importFrom(shinyFiles,shinyFileSave)
importFrom(shinyFiles,shinyFilesButton)
importFrom(shinyFiles,shinySaveButton)
importFrom(shinyWidgets,dropdownButton)
importFrom(shinyWidgets,prettyRadioButtons)
importFrom(shinydashboard,box)
importFrom(shinydashboard,dashboardBody)
importFrom(shinydashboard,dashboardHeader)
importFrom(shinydashboard,dashboardSidebar)
importFrom(shinydashboard,menuItem)
importFrom(shinydashboard,sidebarMenu)
importFrom(shinydashboard,tabItem)
importFrom(shinydashboard,tabItems)
importFrom(shinyhelper,helper)
importFrom(shinyhelper,observe_helpers)
importFrom(shinyjs,alert)
importFrom(shinyjs,hidden)
importFrom(shinyjs,html)
importFrom(shinyjs,runcodeServer)
importFrom(shinyjs,runcodeUI)
importFrom(shinyjs,useShinyjs)
importFrom(stats,runif)
importFrom(stringr,str_detect)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_subset)
importFrom(stringr,str_to_title)
importFrom(tibble,column_to_rownames)
importFrom(tibble,deframe)
importFrom(tibble,enframe)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,drop_na)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,unite)
importFrom(utils,capture.output)
importFrom(utils,data)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(utils,sessionInfo)
importFrom(waiter,Waiter)
importFrom(waiter,spin_loaders)
importFrom(waiter,transparent)
importFrom(waiter,use_waiter)