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NAMESPACE
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## export functions
export(
acfplot,
HPDinterval,
as.array.mcmc.list,
as.mcmc,
as.mcmc.list,
autocorr,
##RGA
autocorr.diag,
autocorr.plot,
##RGA
batchSE,
bugs2jags,
chanames,
coda.options,
codamenu,
crosscorr,
crosscorr.plot,
cumuplot,
densplot,
display.coda.options,
effectiveSize,
gelman.diag,
gelman.plot,
geweke.diag,
geweke.plot,
heidel.diag,
is.mcmc,
is.mcmc.list,
mcmc,
mcmc.list,
mcmcUpgrade,
mcpar,
multi.menu,
nchain,
niter,
nvar,
pcramer,
raftery.diag,
read.and.check,
read.coda.interactive,
read.coda,
read.jags,
read.openbugs,
##RGA
rejectionRate,
spectrum0,
spectrum0.ar,
thin,
traceplot,
varnames,
"varnames<-")
## export data
# export(line)
# this doesn't need to be exported, not sure why, but it works fine
# as is.
# [1] [.mcmc as.matrix.mcmc end.mcmc frequency.mcmc plot.mcmc
# [6] print.mcmc start.mcmc summary.mcmc thin.mcmc time.mcmc
# [11] window.mcmc
# [1] [.mcmc.list as.matrix.mcmc.list as.mcmc.mcmc.list
# [4] end.mcmc.list plot.mcmc.list start.mcmc.list
# [7] summary.mcmc.list thin.mcmc.list time.mcmc.list
# [10] window.mcmc.list
## register S3 methods
S3method(as.mcmc, default)
S3method(as.mcmc.list, default)
S3method(as.ts, mcmc)
## as.matrix
S3method(as.matrix, mcmc)
S3method(as.matrix, mcmc.list)
## mcmc
S3method("[", mcmc)
S3method(end, mcmc)
S3method(frequency, mcmc)
S3method(plot, mcmc)
S3method(print, mcmc)
S3method(start, mcmc)
S3method(summary, mcmc)
S3method(thin, mcmc)
S3method(time, mcmc)
S3method(window, mcmc)
S3method(head, mcmc)
S3method(tail, mcmc)
##RGA
S3method(autocorr.diag, mcmc)
S3method(rejectionRate, mcmc)
S3method(batchSE,mcmc)
S3method(as.data.frame,mcmc)
##DMB
S3method(HPDinterval, mcmc)
## mcmc.list
S3method("[", mcmc.list)
S3method(as.matrix, mcmc.list)
S3method(as.mcmc, mcmc.list)
S3method(as.array, mcmc.list)
S3method(end, mcmc.list)
S3method(plot, mcmc.list)
S3method(start, mcmc.list)
S3method(summary, mcmc.list)
S3method(thin, mcmc.list)
S3method(time, mcmc.list)
S3method(window, mcmc.list)
S3method(head, mcmc.list)
S3method(tail, mcmc.list)
##RGA
S3method(autocorr.diag, mcmc.list)
S3method(rejectionRate, mcmc.list)
S3method(batchSE,mcmc.list)
##DMB
S3method(HPDinterval, mcmc.list)
## misc
S3method(print, gelman.diag)
S3method(print, geweke.diag)
S3method(print, heidel.diag)
S3method(print, raftery.diag)
S3method(print, summary.mcmc)
## Imports
importFrom(grDevices, dev.cur, dev.interactive, dev.off, postscript,
topo.colors, nclass.Sturges)
importFrom(graphics, abline, axis, hist, legend, lines, matplot, par,
plot, polygon, text, title, barplot)
importFrom(lattice, xyplot, qqmath, densityplot, levelplot,
panel.abline, panel.xyplot, trellis.par.get, do.breaks,
panel.superpose, prepanel.qqmathline, splom)
importFrom(stats, Gamma, IQR, acf, aggregate, ar, as.formula, as.ts,
cor, density, end, fft, frequency, glm, lm, lowess, predict, qf,
qnorm, quantile, residuals, sd, start, time, ts, var, window)
importFrom(utils, head, menu, read.table, tail)
## lattice methods
S3method(xyplot, mcmc)
S3method(qqmath, mcmc)
S3method(densityplot, mcmc)
S3method(acfplot, mcmc)
S3method(levelplot, mcmc)
S3method(xyplot, mcmc.list)
S3method(qqmath, mcmc.list)
S3method(densityplot, mcmc.list)
S3method(acfplot, mcmc.list)