From bd67ae47cb65cd1962a23bdad3f48c937613073b Mon Sep 17 00:00:00 2001
From: Olivier Boulant <olivier.boulant@hey.com>
Date: Wed, 20 Oct 2021 11:38:28 +0200
Subject: [PATCH 1/3] add tests in CI for windows pyhton v3.9

---
 .github/workflows/run-test.yml | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/.github/workflows/run-test.yml b/.github/workflows/run-test.yml
index 5350cd89..89428278 100644
--- a/.github/workflows/run-test.yml
+++ b/.github/workflows/run-test.yml
@@ -21,9 +21,6 @@ jobs:
       matrix:
         python-version: [3.6, 3.7, 3.8, 3.9]
         os: [ubuntu-latest, windows-latest, macos-latest]
-        exclude:
-          - os: windows-latest
-            python-version: 3.9
     runs-on: ${{ matrix.os }}
     steps:
     - uses: actions/checkout@v2

From 5f0d6fe6d77a5ece6d1d66b718d6b0515e1e3f75 Mon Sep 17 00:00:00 2001
From: Olivier Boulant <olivier.boulant@hey.com>
Date: Wed, 20 Oct 2021 11:51:29 +0200
Subject: [PATCH 2/3] Merge tests and coverage into a single .yml

---
 .github/workflows/run-test-coverage.yml | 41 -------------------------
 .github/workflows/run-test.yml          | 26 ++++++++++++++--
 2 files changed, 24 insertions(+), 43 deletions(-)
 delete mode 100644 .github/workflows/run-test-coverage.yml

diff --git a/.github/workflows/run-test-coverage.yml b/.github/workflows/run-test-coverage.yml
deleted file mode 100644
index 5e63e643..00000000
--- a/.github/workflows/run-test-coverage.yml
+++ /dev/null
@@ -1,41 +0,0 @@
-# This workflow will install Python dependencies, run tests, generate coverage
-# report and upload it to codecov.
-# For more information, see:
-# https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
-
-name: Run tests with coverage
-
-on:
-  push:
-    branches: [ master ]
-  pull_request:
-    branches: [ master ]
-    paths-ignore:
-      - '.pre-commit-config.yaml'
-      - 'docs/**'
-      - 'images/**'
-      - '**.md'
-      - 'mkdocs.yml'
-
-jobs:
-  coverage:
-    runs-on: ubuntu-latest
-    steps:
-    - uses: actions/checkout@v2
-    - name: Set up Python 3.8
-      uses: actions/setup-python@v2
-      with:
-        python-version: '3.8'
-    - name: Install ruptures
-      run: |
-        python -m pip install --upgrade pip
-        python -m pip install .[test]
-    - name: Test with pytest
-      run: |
-        python -m pytest
-    - name: Upload to Codecov
-      run: |
-        bash <(curl -s https://codecov.io/bash)
-    - uses: actions/upload-artifact@v2
-      with:
-        path: coverage.xml
diff --git a/.github/workflows/run-test.yml b/.github/workflows/run-test.yml
index 89428278..9e30cc97 100644
--- a/.github/workflows/run-test.yml
+++ b/.github/workflows/run-test.yml
@@ -1,7 +1,7 @@
 # This workflow will install Python dependencies, run tests and lint with a variety of Python versions
 # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
 
-name: Run tests
+name: Tests and coverage
 
 on:
   push:
@@ -16,7 +16,7 @@ on:
       - 'mkdocs.yml'
 
 jobs:
-  build:
+  tests:
     strategy:
       matrix:
         python-version: [3.6, 3.7, 3.8, 3.9]
@@ -35,3 +35,25 @@ jobs:
     - name: Test with pytest
       run: |
         python -m pytest --no-cov
+
+  coverage:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v2
+    - name: Set up Python 3.8
+      uses: actions/setup-python@v2
+      with:
+        python-version: '3.8'
+    - name: Install ruptures
+      run: |
+        python -m pip install --upgrade pip
+        python -m pip install .[test]
+    - name: Test with pytest
+      run: |
+        python -m pytest
+    - name: Upload to Codecov
+      run: |
+        bash <(curl -s https://codecov.io/bash)
+    - uses: actions/upload-artifact@v2
+      with:
+        path: coverage.xml

From 741eccec3e843a78b6cbdd615e2aeb3ec728a507 Mon Sep 17 00:00:00 2001
From: Olivier Boulant <olivier.boulant@hey.com>
Date: Wed, 20 Oct 2021 15:07:03 +0200
Subject: [PATCH 3/3] update upload to codecov and actually generate report

---
 .github/workflows/run-test.yml | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/run-test.yml b/.github/workflows/run-test.yml
index 9e30cc97..f8f6a98f 100644
--- a/.github/workflows/run-test.yml
+++ b/.github/workflows/run-test.yml
@@ -50,10 +50,13 @@ jobs:
         python -m pip install .[test]
     - name: Test with pytest
       run: |
-        python -m pytest
-    - name: Upload to Codecov
-      run: |
-        bash <(curl -s https://codecov.io/bash)
+        python -m pytest --cov-report=xml --cov-report=term:skip-covered --cov=src/ruptures
+    - name: Upload coverage to Codecov
+      uses: codecov/codecov-action@v2
+      with:
+        files: ./coverage.xml
+        flags: unittests
+        fail_ci_if_error: true
     - uses: actions/upload-artifact@v2
       with:
         path: coverage.xml