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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>net.imagej</groupId>
<artifactId>pom-imagej</artifactId>
<version>2.27</version>
<relativePath />
</parent>
<groupId>sc.fiji</groupId>
<artifactId>pom-fiji</artifactId>
<version>2.0.0-SNAPSHOT</version>
<packaging>pom</packaging>
<name>Aggregator project for the Fiji project</name>
<description></description>
<properties>
<!-- Temporary, until pom-scijava 2.5 comes out -->
<minimaven.version>2.1.2</minimaven.version>
<autocomplete.version>2.0.2</autocomplete.version>
<batik.version>1.8</batik.version>
<beanshell.version>2.0b4</beanshell.version>
<bunwarpj.version>2.6.1-SNAPSHOT</bunwarpj.version>
<clojure.version>1.3.0</clojure.version>
<commons-math.version>3.2</commons-math.version>
<edu.mines.version>20100113</edu.mines.version>
<fiji.version>2.0.0-SNAPSHOT</fiji.version>
<itextpdf.version>5.1.1</itextpdf.version>
<jama.groupId>gov.nist.math</jama.groupId>
<jama.version>1.0.3</jama.version>
<java3d.version>1.5.2</java3d.version>
<javassist.version>3.16.1-GA</javassist.version>
<jcommon.version>1.0.17</jcommon.version>
<jdom.version>2.0.2</jdom.version>
<jfreechart.version>1.0.14</jfreechart.version>
<jgrapht.version>0.8.3</jgrapht.version>
<jgraphx.version>1.10.4.1</jgraphx.version>
<jna.version>3.2.7</jna.version>
<jpedal.groupId>org.jpedal</jpedal.groupId>
<jpedal.version>2.80b11</jpedal.version>
<jruby.version>1.7.11</jruby.version>
<js.version>1.7R2</js.version>
<jsch.version>0.1.49</jsch.version>
<jython.version>2.5.2</jython.version>
<jzlib.version>1.0.7</jzlib.version>
<mpicbg.version>0.6.1</mpicbg.version>
<rsyntaxtextarea.version>2.0.4.1</rsyntaxtextarea.version>
<scala.version>2.10.0</scala.version>
<weka.version>3.7.6</weka.version>
<!-- Fiji sub-projects -->
<AnalyzeSkeleton.version>2.0.0-SNAPSHOT</AnalyzeSkeleton.version>
<Analyze_Reader_Writer.version>2.0.0-SNAPSHOT</Analyze_Reader_Writer.version>
<Anisotropic_Diffusion_2D.version>2.0.0-SNAPSHOT</Anisotropic_Diffusion_2D.version>
<Archipelago_Plugins.version>0.5.0-SNAPSHOT</Archipelago_Plugins.version>
<Arrow_.version>2.0.0-SNAPSHOT</Arrow_.version>
<Auto_Threshold.version>1.16-SNAPSHOT</Auto_Threshold.version>
<BalloonSegmentation_.version>2.0.0-SNAPSHOT</BalloonSegmentation_.version>
<BeanShell_Interpreter.version>2.0.0-SNAPSHOT</BeanShell_Interpreter.version>
<Bug_Submitter.version>2.0.0-SNAPSHOT</Bug_Submitter.version>
<CLI_.version>2.0.0-SNAPSHOT</CLI_.version>
<CPU_Meter.version>2.0.0-SNAPSHOT</CPU_Meter.version>
<Calculator_Plus.version>2.0.0-SNAPSHOT</Calculator_Plus.version>
<Clojure_Interpreter.version>2.0.0-SNAPSHOT</Clojure_Interpreter.version>
<Colocalisation_Analysis.version>2.0.0-SNAPSHOT</Colocalisation_Analysis.version>
<Color_Histogram.version>2.0.6-SNAPSHOT</Color_Histogram.version>
<Color_Inspector_3D.version>2.4-SNAPSHOT</Color_Inspector_3D.version>
<Colour_Deconvolution.version>2.0.0-SNAPSHOT</Colour_Deconvolution.version>
<CorrectBleach_.version>2.0.0-SNAPSHOT</CorrectBleach_.version>
<Descriptor_based_registration.version>2.0.0-SNAPSHOT</Descriptor_based_registration.version>
<Dichromacy_.version>2.0.0-SNAPSHOT</Dichromacy_.version>
<Differentials_.version>2.0.0-SNAPSHOT</Differentials_.version>
<Directionality_.version>2.0.1-SNAPSHOT</Directionality_.version>
<Extended_Depth_Field.version>2.0.0-SNAPSHOT</Extended_Depth_Field.version>
<FS_Align_TrakEM2.version>2.0.0-SNAPSHOT</FS_Align_TrakEM2.version>
<FeatureJ_.version>1.6.1-SNAPSHOT</FeatureJ_.version>
<Feature_Detection.version>2.0.0-SNAPSHOT</Feature_Detection.version>
<Fiji_3D_Blob_Segmentation.version>2.0.0-SNAPSHOT</Fiji_3D_Blob_Segmentation.version>
<Fiji_Archipelago.version>2.0.0-SNAPSHOT</Fiji_Archipelago.version>
<Fiji_Developer.version>2.0.0-SNAPSHOT</Fiji_Developer.version>
<Fiji_Package_Maker.version>2.0.0-SNAPSHOT</Fiji_Package_Maker.version>
<Fiji_Plugins.version>2.0.0-SNAPSHOT</Fiji_Plugins.version>
<Fiji_Updater.version>2.0.0-SNAPSHOT</Fiji_Updater.version>
<FlowJ_.version>1.29.1-SNAPSHOT</FlowJ_.version>
<Graph_Cut.version>0.2.0</Graph_Cut.version>
<Gray_Morphology.version>2.3.2-SNAPSHOT</Gray_Morphology.version>
<Helmholtz_Analysis.version>2.0.1-SNAPSHOT</Helmholtz_Analysis.version>
<IJ_Robot.version>1.0.0</IJ_Robot.version>
<IO_.version>2.0.0-SNAPSHOT</IO_.version>
<ImageJ_3D_Objects_Counter.version>2.0.0-SNAPSHOT</ImageJ_3D_Objects_Counter.version>
<ImageJ_3D_Viewer.version>2.0.0-SNAPSHOT</ImageJ_3D_Viewer.version>
<Image_Expression_Parser.version>2.0.0-SNAPSHOT</Image_Expression_Parser.version>
<Interactive_3D_Surface_Plot.version>2.31.1-SNAPSHOT</Interactive_3D_Surface_Plot.version>
<IsoData_Classifier.version>2.0.0-SNAPSHOT</IsoData_Classifier.version>
<JRuby_Interpreter.version>2.0.0-SNAPSHOT</JRuby_Interpreter.version>
<Javascript_.version>2.0.0-SNAPSHOT</Javascript_.version>
<Jython_Interpreter.version>2.0.0-SNAPSHOT</Jython_Interpreter.version>
<Kuwahara_Filter.version>2.0.0-SNAPSHOT</Kuwahara_Filter.version>
<Lasso_and_Blow_Tool.version>2.0.0-SNAPSHOT</Lasso_and_Blow_Tool.version>
<Linear_Kuwahara.version>2.0.0-SNAPSHOT</Linear_Kuwahara.version>
<LocalThickness_.version>3.1.1-SNAPSHOT</LocalThickness_.version>
<MTrack2_.version>2.0.0-SNAPSHOT</MTrack2_.version>
<MTrackJ_.version>1.5.1-SNAPSHOT</MTrackJ_.version>
<M_I_P.version>2.0.0-SNAPSHOT</M_I_P.version>
<Manual_Tracking.version>2.0.0-SNAPSHOT</Manual_Tracking.version>
<MosaicJ_.version>2.0.0-SNAPSHOT</MosaicJ_.version>
<Multi_Kymograph.version>2.0.0-SNAPSHOT</Multi_Kymograph.version>
<PIV_analyser.version>1.1.1-SNAPSHOT</PIV_analyser.version>
<PointPicker_.version>2.0.0-SNAPSHOT</PointPicker_.version>
<QuickPALM_.version>1.1.1-SNAPSHOT</QuickPALM_.version>
<RATS_.version>2.0.0-SNAPSHOT</RATS_.version>
<RandomJ_.version>1.5.1-SNAPSHOT</RandomJ_.version>
<Reconstruct_Reader.version>2.0.0-SNAPSHOT</Reconstruct_Reader.version>
<Refresh_Javas.version>2.0.0-SNAPSHOT</Refresh_Javas.version>
<SPIM_Opener.version>2.0.0-SNAPSHOT</SPIM_Opener.version>
<SPIM_Registration.version>2.0.0-SNAPSHOT</SPIM_Registration.version>
<Samples_.version>2.0.0-SNAPSHOT</Samples_.version>
<Scala_Interpreter.version>1.0.2-SNAPSHOT</Scala_Interpreter.version>
<Series_Labeler.version>2.0.0-SNAPSHOT</Series_Labeler.version>
<SheppLogan_.version>2.0.0-SNAPSHOT</SheppLogan_.version>
<Sholl_Analysis.version>3.4.1</Sholl_Analysis.version>
<Simple_Neurite_Tracer.version>2.0.2-SNAPSHOT</Simple_Neurite_Tracer.version>
<Siox_Segmentation.version>1.0.1-SNAPSHOT</Siox_Segmentation.version>
<Skeletonize3D_.version>1.0.1-SNAPSHOT</Skeletonize3D_.version>
<Snakuscule_.version>2.0.0-SNAPSHOT</Snakuscule_.version>
<SplineDeformationGenerator_.version>2.0.0-SNAPSHOT</SplineDeformationGenerator_.version>
<StackReg_.version>2.0.0-SNAPSHOT</StackReg_.version>
<Stack_Manipulation.version>2.0.0-SNAPSHOT</Stack_Manipulation.version>
<Statistical_Region_Merging.version>2.0.0-SNAPSHOT</Statistical_Region_Merging.version>
<Stitching.version>2.0.0-SNAPSHOT</Stitching.version>
<Sync_Win.version>1.7-fiji2-SNAPSHOT</Sync_Win.version>
<Thread_Killer.version>2.0.0-SNAPSHOT</Thread_Killer.version>
<Threshold_Colour.version>2.0.1-SNAPSHOT</Threshold_Colour.version>
<Time_Stamper.version>2.0.0-SNAPSHOT</Time_Stamper.version>
<ToAST_.version>25.0.1-SNAPSHOT</ToAST_.version>
<TopoJ_.version>2.0.0-SNAPSHOT</TopoJ_.version>
<TrackMate.version>2.3.0-SNAPSHOT</TrackMate.version>
<Trainable_Segmentation.version>2.0.0</Trainable_Segmentation.version>
<TrakEM2_Archipelago.version>2.0.0-SNAPSHOT</TrakEM2_Archipelago.version>
<TransformJ_.version>2.8.1-SNAPSHOT</TransformJ_.version>
<TurboReg_.version>2.0.0-SNAPSHOT</TurboReg_.version>
<UnwarpJ_.version>2.0.0-SNAPSHOT</UnwarpJ_.version>
<VIB-lib.version>2.0.0-SNAPSHOT</VIB-lib.version>
<VIB_.version>2.0.0-SNAPSHOT</VIB_.version>
<Vaa3d_Reader.version>2.0.0-SNAPSHOT</Vaa3d_Reader.version>
<Vaa3d_Writer.version>1.0.0</Vaa3d_Writer.version>
<Video_Editing.version>2.0.0-SNAPSHOT</Video_Editing.version>
<View5D_.version>1.3.1-SNAPSHOT</View5D_.version>
<Volume_Calculator.version>1.0.1-SNAPSHOT</Volume_Calculator.version>
<Volume_Viewer.version>2.01.1-SNAPSHOT</Volume_Viewer.version>
<bUnwarpJ_.version>2.6.1-SNAPSHOT</bUnwarpJ_.version>
<blockmatching_.version>2.0.0-SNAPSHOT</blockmatching_.version>
<fake.version>2.0.0-SNAPSHOT</fake.version>
<fiji-compat.version>2.0.0-SNAPSHOT</fiji-compat.version>
<fiji-lib.version>2.0.0</fiji-lib.version>
<fiji-scripting.version>2.0.0-SNAPSHOT</fiji-scripting.version>
<image5d.version>1.2.5</image5d.version>
<imagescience.version>2.4.2-SNAPSHOT</imagescience.version>
<imagescience.version>2.4.2-SNAPSHOT</imagescience.version>
<imageware.version>2.0.0-SNAPSHOT</imageware.version>
<javac.version>1.6.0.24-ubuntu-fiji1</javac.version>
<jep.groupId>org.scijava</jep.groupId>
<jep.version>2.4.2</jep.version>
<legacy-imglib1.version>2.0.0-SNAPSHOT</legacy-imglib1.version>
<level_sets.version>1.0.1-SNAPSHOT</level_sets.version>
<level_sets.version>1.0.1-SNAPSHOT</level_sets.version>
<mij.version>1.3.6-fiji2-SNAPSHOT</mij.version>
<pal-optimization.version>2.0.0-SNAPSHOT</pal-optimization.version>
<panorama_.version>2.0.0-SNAPSHOT</panorama_.version>
<register_virtual_stack_slices.version>2.0.0-SNAPSHOT</register_virtual_stack_slices.version>
<registration_3d.version>2.0.0-SNAPSHOT</registration_3d.version>
<skeletonize3d.version>1.0.1-SNAPSHOT</skeletonize3d.version>
<trakem2.version>1.0b-SNAPSHOT</trakem2.version>
<wavelets.version>2.0.0-SNAPSHOT</wavelets.version>
<weave_jy2java.version>2.0.0-SNAPSHOT</weave_jy2java.version>
</properties>
<modules>
<module>external</module>
<module>modules</module>
</modules>
<build>
<plugins>
<plugin>
<groupId>net.imagej</groupId>
<artifactId>imagej-maven-plugin</artifactId>
<version>${imagej-maven-plugin.version}</version>
<configuration>
<deleteOtherVersions>true</deleteOtherVersions>
</configuration>
<executions>
<execution>
<id>copy-jars</id>
<phase>install</phase>
<goals>
<goal>copy-jars</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.scijava</groupId>
<artifactId>scijava-maven-plugin</artifactId>
<version>${scijava-maven-plugin.version}</version>
<executions>
<execution>
<id>set-rootdir</id>
<phase>validate</phase>
<goals>
<goal>set-rootdir</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-source-plugin</artifactId>
<executions>
<execution>
<id>attach-sources</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-javadoc-plugin</artifactId>
<configuration>
<skip>${javadoc.skip}</skip>
</configuration>
<executions>
<execution>
<id>attach-javadocs</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
<mailingLists>
<mailingList>
<name>ImageJ</name>
<subscribe>http://imagej.net/list.html</subscribe>
<unsubscribe>http://imagej.net/list.html</unsubscribe>
<post>imagej@list.nih.gov</post>
<archive>http://list.nih.gov/archives/imagej.html</archive>
</mailingList>
<mailingList>
<name>Fiji-devel</name>
<subscribe>http://groups.google.com/group/fiji-devel</subscribe>
<unsubscribe>http://groups.google.com/group/fiji-devel</unsubscribe>
<post>fiji@fiji.sc</post>
<archive>http://groups.google.com/group/fiji-devel</archive>
</mailingList>
</mailingLists>
<scm>
<connection>scm:git:git://github.com/fiji/fiji</connection>
<developerConnection>scm:git:git@github.com:fiji/fiji</developerConnection>
<tag>HEAD</tag>
<url>https://github.com/fiji/fiji</url>
</scm>
<reporting>
<plugins>
<plugin>
<artifactId>maven-javadoc-plugin</artifactId>
<version>2.8.1</version>
<configuration>
<links combine.children="append">
<link>http://jenkins.imagej.net/job/ImageJ-daily/javadoc</link>
<link>http://jenkins.imagej.net/job/ImgLib-daily/javadoc</link>
<link>http://jenkins.imagej.net/job/ImageJ1-javadoc/javadoc</link>
<link>http://weka.sourceforge.net/doc.dev/</link>
</links>
</configuration>
</plugin>
</plugins>
</reporting>
<repositories>
<!-- NB: for project parent -->
<repository>
<id>imagej.public</id>
<url>http://maven.imagej.net/content/groups/public</url>
</repository>
</repositories>
<!-- NB: for deploying to maven.imagej.net -->
<distributionManagement>
<repository>
<id>imagej.releases</id>
<name>ImageJ Releases Repository</name>
<url>dav:http://maven.imagej.net/content/repositories/releases</url>
</repository>
<snapshotRepository>
<id>imagej.snapshots</id>
<name>ImageJ Snapshots Repository</name>
<url>dav:http://maven.imagej.net/content/repositories/snapshots</url>
</snapshotRepository>
</distributionManagement>
<profiles>
<!-- HACK: Eclipse in JDK 1.5 mode does not like @Override for methods implemention interfaces. -->
<profile>
<id>no-eclipse</id>
<activation>
<property>
<name>!m2e.version</name>
</property>
</activation>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<source>1.5</source>
<target>1.5</target>
</configuration>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>macosx</id>
<activation>
<os>
<name>Mac OS X</name>
</os>
</activation>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<compilerArgument>-Djava.ext.dirs=${rootdir}/java/macosx-java3d/Home/lib/ext</compilerArgument>
</configuration>
</plugin>
</plugins>
</build>
</profile>
</profiles>
</project>