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Broken URLs in tutorials #554

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matentzn opened this issue Mar 24, 2024 · 2 comments
Closed

Broken URLs in tutorials #554

matentzn opened this issue Mar 24, 2024 · 2 comments

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@matentzn
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I am doing https://oboacademy.github.io/obook/tutorial/exomiser-tutorial/

It seems the URL to the phenotype and variant databases dont work anymore:

2302_phenotype.zip is mentioned, but seems only 2402_phenotype.zip exists.

https://data.monarchinitiative.org/exomiser/latest/index.html

Can you fix the URLs in the tutorial? Either

  1. Do not use latest
  2. Provide a stable URL that will always work, e.g. https://data.monarchinitiative.org/exomiser/latest/phenotype.zip (using an htaccess alias).

cc @yaseminbridges

@nlharris
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nlharris commented Nov 4, 2024

Did this get fixed?

@julesjacobsen
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The data is all in the https://data.monarchinitiative.org/exomiser/data/index.html directory, the binaries are in https://data.monarchinitiative.org/exomiser/index.html and https://data.monarchinitiative.org/exomiser/latest/index.html contains the latest versions of all these. So, just link directly to the version you want for the tutorial would be simplest and won't break anyone's existing workflows.

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