Exomiser Cli Version 14.00 Distroless Internal Singularity Path

[yr542]

I am having difficulty looking inside the Exomiser singularity and I cannot seem to run it despite the singularity being installed:

singularity exec \
  --bind "/path/to/directory/containing/vcfs/directory" \
  --bind  "/path/to/output/directory" \
  "/path/to/exomiser-cli_14.0.0-distroless.sif" \
  java -Xms4g -Xmx8g -jar "/exomiser-cli.jar" \
  --analysis "/path/to/pilot/file.yml"

It seems to run bit and then I get the following errors:

Error: Unable to access jarfile /exomiser-cli.jar

Could get the internal path of the singularity? I cannot seem to get the command to run without it?

[julesjacobsen]

I haven't tried running this with Singularity - can you use Docker/Podman with this image? Alternatively, there is the Debian based version with a shell: docker pull exomiser/exomiser-cli:14.0.0