Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

Interactive BlobToolKit: not displaying output #19339

Open
Smeds opened this issue Dec 17, 2024 · 1 comment
Open

Interactive BlobToolKit: not displaying output #19339

Smeds opened this issue Dec 17, 2024 · 1 comment

Comments

@Smeds
Copy link

Smeds commented Dec 17, 2024

Describe the bug

Pull-request 18630 adds Interactive BlobToolkit to the list of interactive tools. The tool is visible, will run successfully but not display any output.

Tool Standard Output

Restarting nginx: nginxserver started on port 8080
blobtoolkit-api started on http port: 8000

Tool Standard Error

2024/12/16 20:33:23 [warn] 16#16: the "user" directive makes sense only if the master process runs with super-user privileges, ignored in /etc/nginx/nginx.conf:2
nginx: [warn] the "user" directive makes sense only if the master process runs with super-user privileges, ignored in /etc/nginx/nginx.conf:2
2024/12/16 20:33:23 [emerg] 16#16: open() "/var/run/nginx.pid" failed (13: Permission denied)
nginx: [emerg] open() "/var/run/nginx.pid" failed (13: Permission denied)
nginx: configuration file /etc/nginx/nginx.conf test failed

History
https://test.galaxyproject.org/u/smeds/h/case-1-chondrosia-reniformis

Galaxy Version

Galaxy Version: 24.2 (test server)

Browser and Operating System

Operating System: Linux
Browser: Firefox, Chrome

To Reproduce

Steps to reproduce the behavior:

  1. Follow tutorial to generate interactive plots
  2. Try to inspect the output

Expected behavior

Show a output from Interactive BlobToolKit

@mvdbeek
Copy link
Member

mvdbeek commented Dec 17, 2024

@natefoo can you take a look at this ?

# for free to join this conversation on GitHub. Already have an account? # to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants