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I do not understand the following (for IUC tool tools/ete-toolkit/ete-treeviewer.xml):
Linting tool tools/ete-toolkit/ete-treeviewer.xml
.. WARNING: Test 5: failed to validate assertions. Validation errors are [188 validation errors for RootModel[List[Union[Annotated[Union[has_line_model, has_line_matching_model, has_n_lines_model, has_text_model, has_text_matching_model, not_has_text_model, has_n_columns_model, attribute_is_model, attribute_matches_model, element_text_model, element_text_is_model, element_text_matches_model, has_element_with_path_model, has_n_elements_with_path_model, is_valid_xml_model, xml_element_model, has_json_property_with_text_model, has_json_property_with_value_model, has_h5_attribute_model, has_h5_keys_model, has_archive_member_model, has_size_model, has_image_center_of_mass_model, has_image_channels_model, has_image_depth_model, has_image_frames_model, has_image_height_model, has_image_mean_intensity_model, has_image_mean_object_size_model, has_image_n_labels_model, has_image_width_model], FieldInfo(annotation=NoneType, required=True, discriminator='that')], has_line_model_nested, has_line_matching_model_nested, has_n_lines_model_nested, has_text_model_nested, has_text_matching_model_nested, not_has_text_model_nested, has_n_columns_model_nested, attribute_is_model_nested, attribute_matches_model_nested, element_text_model_nested, element_text_is_model_nested, element_text_matches_model_nested, has_element_with_path_model_nested, has_n_elements_with_path_model_nested, is_valid_xml_model_nested, xml_element_model_nested, has_json_property_with_text_model_nested, has_json_property_with_value_model_nested, has_h5_attribute_model_nested, has_h5_keys_model_nested, has_archive_member_model_nested, has_size_model_nested, has_image_center_of_mass_model_nested, has_image_channels_model_nested, has_image_depth_model_nested, has_image_frames_model_nested, has_image_height_model_nested, has_image_mean_intensity_model_nested, has_image_mean_object_size_model_nested, has_image_n_labels_model_nested, has_image_width_model_nested]]]
0.tagged-union[has_line_model,has_line_matching_model,has_n_lines_model,has_text_model,has_text_matching_model,not_has_text_model,has_n_columns_model,attribute_is_model,attribute_matches_model,element_text_model,element_text_is_model,element_text_matches_model,has_element_with_path_model,has_n_elements_with_path_model,is_valid_xml_model,xml_element_model,has_json_property_with_text_model,has_json_property_with_value_model,has_h5_attribute_model,has_h5_keys_model,has_archive_member_model,has_size_model,has_image_center_of_mass_model,has_image_channels_model,has_image_depth_model,has_image_frames_model,has_image_height_model,has_image_mean_intensity_model,has_image_mean_object_size_model,has_image_n_labels_model,has_image_width_model].has_image_width.min
Assertion failed, Invalid type found 500 [type=assertion_error, input_value='500', input_type=str]
0.has_line_model_nested.has_line
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.has_line_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.has_line_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.has_line_matching_model_nested.has_line_matching
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.has_line_matching_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.has_line_matching_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.has_n_lines_model_nested.has_n_lines
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.has_n_lines_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.has_n_lines_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.has_text_model_nested.has_text
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.has_text_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.has_text_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.has_text_matching_model_nested.has_text_matching
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.has_text_matching_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.has_text_matching_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.not_has_text_model_nested.not_has_text
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
0.not_has_text_model_nested.that
Extra inputs are not permitted [type=extra_forbidden, input_value='has_image_width', input_type=str]
0.not_has_text_model_nested.min
Extra inputs are not permitted [type=extra_forbidden, input_value='500', input_type=str]
0.has_n_columns_model_nested.has_n_columns
Field required [type=missing, input_value={'that': 'has_image_width', 'min': '500'}, input_type=dict]
...
Galaxy Version and/or server at which you observed the bug
Galaxy Version: (check <galaxy_url>/api/version if you don't know)
Commit: (run git rev-parse HEAD if you run this Galaxy server)
Browser and Operating System
Operating System: Windows, Linux, macOS
Browser: Firefox, Chrome, Chrome-based, Safari
To Reproduce
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Expected behavior
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The text was updated successfully, but these errors were encountered:
Yeah - this is just a dumb @jmchilton bug. Sorry about this. We're validating the conversion of the XML to dictionaries with teh YAML/JSON models which have more strict typing. So while all the methods are annotated as potentially consuming strings (like "500" coming from the XML), the validation done by the linter is not taking that into account. I'm not sure how to fix it but I'm working on it.
Describe the bug
I do not understand the following (for IUC tool tools/ete-toolkit/ete-treeviewer.xml):
Galaxy Version and/or server at which you observed the bug
Galaxy Version: (check <galaxy_url>/api/version if you don't know)
Commit: (run
git rev-parse HEAD
if you run this Galaxy server)Browser and Operating System
Operating System: Windows, Linux, macOS
Browser: Firefox, Chrome, Chrome-based, Safari
To Reproduce
Steps to reproduce the behavior:
Expected behavior
A clear and concise description of what you expected to happen.
Screenshots
If applicable, add screenshots to help explain your problem.
Additional context
Add any other context about the problem here.
The text was updated successfully, but these errors were encountered: