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Row duplications upon submitting MS1 file with MGF #132

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justinjjvanderhooft opened this issue Apr 6, 2018 · 0 comments
Open

Row duplications upon submitting MS1 file with MGF #132

justinjjvanderhooft opened this issue Apr 6, 2018 · 0 comments
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@justinjjvanderhooft
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In experiment FungalGardens_EastCoastUSA_Mauricio_MS1FeatureTable_included (615), Madeleine and myself noticed some strange row duplications: each have the same precursor mass and spectra - but slightly different RTs. Any idea where they could come from? I did not notice them before....
FYI: in the MS1 file, each row ID is unique, whereas in the MS2LDA output some row IDs are duplicated or even more. I attached a screenshot of the triplication(!) of row 8 - and you have access to the experiment now as well.

I also attached the MS1 file I used - and the MGF. Note that I changed the extensions from csv and MGF to txt!

FungalGardens_Mauricio_MS1.txt

schermafdruk 2018-04-06 12 07 27
METABOLOMICS-SNETS-caee1ea1-download_clustered_spectra-main.txt

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