diff --git a/environment.yml b/environment.yml index 9fdcc80..4c0ebf8 100644 --- a/environment.yml +++ b/environment.yml @@ -15,6 +15,7 @@ dependencies: - scikit-image=0.14.2 - jupyter=1.0.0 - tqdm=4.55.2 + - ipympl=0.9.3 - pip - pip: - opencv-python==4.2.0.34 diff --git a/requirements.txt b/requirements.txt index a0fda1b..c3c3225 100644 --- a/requirements.txt +++ b/requirements.txt @@ -2,6 +2,7 @@ numpy matplotlib scipy ipywidgets +ipympl scikit-image jupyter opencv-python diff --git a/setup.py b/setup.py index 48d989b..85373fc 100644 --- a/setup.py +++ b/setup.py @@ -16,6 +16,7 @@ "matplotlib", "scipy", "ipywidgets", + "ipympl", "scikit-image", "jupyter", "opencv-python", @@ -24,7 +25,7 @@ "tqdm", "pandas", "absl-py", - "matplotlib-polyroi==0.1.6", + "matplotlib-polyroi>=0.1.6", ], description="Cell cortex segmentation in C. elegans PAR protein images", long_description=long_description,