diff --git a/README.md b/README.md index 6d6bf1e..abb1485 100644 --- a/README.md +++ b/README.md @@ -99,8 +99,8 @@ one can calculate: $ samtools fastq ${SAMPLE}.bam > ${SAMPLE}_filtered.fastq - 4. Infer types: + 4. Infer types (see `$ multi_par --help` for further details): - $ multi_par path-to-imgthla/aignments ${SAMPLE}_filtered.fast -o ${SAMPLE}_output.tsv + $ multi_par path-to-imgthla/aignments ${SAMPLE}_filtered.fastq -o ${SAMPLE}_output.tsv - See `$ multi_par --help` for further detail and optimizations. +