Manifest.toml

# This file is machine-generated - editing it directly is not advised

[[ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"

[[ArnoldiMethod]]
deps = ["LinearAlgebra", "Random", "StaticArrays"]
git-tree-sha1 = "62e51b39331de8911e4a7ff6f5aaf38a5f4cc0ae"
uuid = "ec485272-7323-5ecc-a04f-4719b315124d"
version = "0.2.0"

[[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"

[[AssetRegistry]]
deps = ["Distributed", "JSON", "Pidfile", "SHA", "Test"]
git-tree-sha1 = "b25e88db7944f98789130d7b503276bc34bc098e"
uuid = "bf4720bc-e11a-5d0c-854e-bdca1663c893"
version = "0.1.0"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BinDeps]]
deps = ["Libdl", "Pkg", "SHA", "URIParser", "Unicode"]
git-tree-sha1 = "1289b57e8cf019aede076edab0587eb9644175bd"
uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee"
version = "1.0.2"

[[BioAlignments]]
deps = ["BioGenerics", "BioSequences", "BioSymbols", "IntervalTrees", "LinearAlgebra"]
git-tree-sha1 = "57c7685392a0533db41a05340b3b1a45ee468deb"
repo-rev = "master"
repo-url = "https://github.com/BioJulia/BioAlignments.jl.git"
uuid = "00701ae9-d1dc-5365-b64a-a3a3ebf5695e"
version = "2.2.0"

[[BioGenerics]]
deps = ["TranscodingStreams"]
git-tree-sha1 = "0b581906418b93231d391b5dd78831fdc2da0c82"
uuid = "47718e42-2ac5-11e9-14af-e5595289c2ea"
version = "0.1.2"

[[BioSequences]]
deps = ["BioSymbols", "Random", "SnoopPrecompile", "Twiddle"]
git-tree-sha1 = "e67b5446b44d96595ededa2b32ab0f2f6b3d2997"
uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
version = "3.1.2"

[[BioSymbols]]
deps = ["SnoopPrecompile"]
git-tree-sha1 = "2052c3ec7c41b69efa0e9ff7e2734aa6658d4c40"
uuid = "3c28c6f8-a34d-59c4-9654-267d177fcfa9"
version = "5.1.2"

[[BlackBoxOptim]]
deps = ["CPUTime", "Compat", "Distributed", "Distributions", "HTTP", "JSON", "LinearAlgebra", "Printf", "Random", "SpatialIndexing", "StatsBase"]
git-tree-sha1 = "136079f37e3514ec691926093924b591a8842f5d"
uuid = "a134a8b2-14d6-55f6-9291-3336d3ab0209"
version = "0.6.2"

[[Blink]]
deps = ["Base64", "BinDeps", "Distributed", "JSExpr", "JSON", "Lazy", "Logging", "MacroTools", "Mustache", "Mux", "Reexport", "Sockets", "WebIO", "WebSockets"]
git-tree-sha1 = "08d0b679fd7caa49e2bca9214b131289e19808c0"
uuid = "ad839575-38b3-5650-b840-f874b8c74a25"
version = "0.12.5"

[[CPUTime]]
git-tree-sha1 = "2dcc50ea6a0a1ef6440d6eecd0fe3813e5671f45"
uuid = "a9c8d775-2e2e-55fc-8582-045d282d599e"
version = "1.0.0"

[[CSV]]
deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"]
git-tree-sha1 = "c5fd7cd27ac4aed0acf4b73948f0110ff2a854b2"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.10.7"

[[Calculus]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad"
uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
version = "0.5.1"

[[CategoricalArrays]]
deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"]
git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2"
uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597"
version = "0.10.7"

[[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "e7ff6cadf743c098e08fca25c91103ee4303c9bb"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.15.6"

[[ChangesOfVariables]]
deps = ["ChainRulesCore", "LinearAlgebra", "Test"]
git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8"
uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
version = "0.1.4"

[[Clustering]]
deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"]
git-tree-sha1 = "64df3da1d2a26f4de23871cd1b6482bb68092bd5"
uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5"
version = "0.14.3"

[[CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da"
uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
version = "0.7.0"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.11.4"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "Reexport"]
git-tree-sha1 = "417b0ed7b8b838aa6ca0a87aadf1bb9eb111ce40"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.12.8"

[[Compat]]
deps = ["Dates", "LinearAlgebra", "UUIDs"]
git-tree-sha1 = "00a2cccc7f098ff3b66806862d275ca3db9e6e5a"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "4.5.0"

[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"

[[Crayons]]
git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15"
uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f"
version = "4.1.1"

[[DataAPI]]
git-tree-sha1 = "e08915633fcb3ea83bf9d6126292e5bc5c739922"
uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
version = "1.13.0"

[[DataFrames]]
deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
git-tree-sha1 = "d4f69885afa5e6149d0cab3818491565cf41446d"
uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
version = "1.4.4"

[[DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.18.13"

[[DataValueInterfaces]]
git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464"
version = "1.0.0"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[DensityInterface]]
deps = ["InverseFunctions", "Test"]
git-tree-sha1 = "80c3e8639e3353e5d2912fb3a1916b8455e2494b"
uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
version = "0.4.0"

[[Distances]]
deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "3258d0659f812acde79e8a74b11f17ac06d0ca04"
uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
version = "0.10.7"

[[Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]]
deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
git-tree-sha1 = "a7756d098cbabec6b3ac44f369f74915e8cfd70a"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.79"

[[DocStringExtensions]]
deps = ["LibGit2"]
git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.8.6"

[[Downloads]]
deps = ["ArgTools", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"

[[DualNumbers]]
deps = ["Calculus", "NaNMath", "SpecialFunctions"]
git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566"
uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74"
version = "0.6.8"

[[ExprTools]]
git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d"
uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04"
version = "0.1.8"

[[EzXML]]
deps = ["Printf", "XML2_jll"]
git-tree-sha1 = "0fa3b52a04a4e210aeb1626def9c90df3ae65268"
uuid = "8f5d6c58-4d21-5cfd-889c-e3ad7ee6a615"
version = "1.1.0"

[[FastaIO]]
deps = ["GZip"]
git-tree-sha1 = "1656782ed1b7c3643c5196aadf8e5107569daaa0"
uuid = "a0c94c4b-ebed-5953-b5fc-82fe598ac79f"
version = "1.0.0"

[[FileIO]]
deps = ["Pkg", "Requires", "UUIDs"]
git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.16.0"

[[FilePathsBase]]
deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"]
git-tree-sha1 = "e27c4ebe80e8699540f2d6c805cc12203b614f12"
uuid = "48062228-2e41-5def-b9a4-89aafe57970f"
version = "0.9.20"

[[FileWatching]]
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"

[[FillArrays]]
deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"]
git-tree-sha1 = "802bfc139833d2ba893dd9e62ba1767c88d708ae"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "0.13.5"

[[FixedPointNumbers]]
deps = ["Statistics"]
git-tree-sha1 = "335bfdceacc84c5cdf16aadc768aa5ddfc5383cc"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.8.4"

[[Formatting]]
deps = ["Printf"]
git-tree-sha1 = "8339d61043228fdd3eb658d86c926cb282ae72a8"
uuid = "59287772-0a20-5a39-b81b-1366585eb4c0"
version = "0.4.2"

[[FunctionalCollections]]
deps = ["Test"]
git-tree-sha1 = "04cb9cfaa6ba5311973994fe3496ddec19b6292a"
uuid = "de31a74c-ac4f-5751-b3fd-e18cd04993ca"
version = "0.5.0"

[[Future]]
deps = ["Random"]
uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"

[[GZip]]
deps = ["Libdl"]
git-tree-sha1 = "039be665faf0b8ae36e089cd694233f5dee3f7d6"
uuid = "92fee26a-97fe-5a0c-ad85-20a5f3185b63"
version = "0.5.1"

[[Graphs]]
deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
git-tree-sha1 = "ba2d094a88b6b287bd25cfa86f301e7693ffae2f"
uuid = "86223c79-3864-5bf0-83f7-82e725a168b6"
version = "1.7.4"

[[HTTP]]
deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"]
git-tree-sha1 = "0fa77022fe4b511826b39c894c90daf5fce3334a"
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
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[[Hiccup]]
deps = ["MacroTools", "Test"]
git-tree-sha1 = "6187bb2d5fcbb2007c39e7ac53308b0d371124bd"
uuid = "9fb69e20-1954-56bb-a84f-559cc56a8ff7"
version = "0.2.2"

[[HypergeometricFunctions]]
deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"]
git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641"
uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a"
version = "0.3.11"

[[Inflate]]
git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428"
uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9"
version = "0.1.3"

[[IniFile]]
git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625"
uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f"
version = "0.5.1"

[[InlineStrings]]
deps = ["Parsers"]
git-tree-sha1 = "0cf92ec945125946352f3d46c96976ab972bde6f"
uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48"
version = "1.3.2"

[[InteractiveUtils]]
deps = ["Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[IntervalTrees]]
deps = ["InteractiveUtils", "Profile", "Random", "Test"]
git-tree-sha1 = "6c9fcd87677231ae293f6806fad928c216ab6658"
uuid = "524e6230-43b7-53ae-be76-1e9e4d08d11b"
version = "1.0.0"

[[InverseFunctions]]
deps = ["Test"]
git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f"
uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
version = "0.1.8"

[[InvertedIndices]]
git-tree-sha1 = "82aec7a3dd64f4d9584659dc0b62ef7db2ef3e19"
uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f"
version = "1.2.0"

[[IrrationalConstants]]
git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151"
uuid = "92d709cd-6900-40b7-9082-c6be49f344b6"
version = "0.1.1"

[[IteratorInterfaceExtensions]]
git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856"
uuid = "82899510-4779-5014-852e-03e436cf321d"
version = "1.0.0"

[[JLLWrappers]]
deps = ["Preferences"]
git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1"
uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
version = "1.4.1"

[[JSExpr]]
deps = ["JSON", "MacroTools", "Observables", "WebIO"]
git-tree-sha1 = "b413a73785b98474d8af24fd4c8a975e31df3658"
uuid = "97c1335a-c9c5-57fe-bc5d-ec35cebe8660"
version = "0.5.4"

[[JSON]]
deps = ["Dates", "Mmap", "Parsers", "Unicode"]
git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.3"

[[LaTeXStrings]]
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uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
version = "1.3.0"

[[Lazy]]
deps = ["MacroTools"]
git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f"
uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0"
version = "0.15.1"

[[LazyArtifacts]]
deps = ["Artifacts", "Pkg"]
uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"

[[LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"

[[LibCURL_jll]]
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"

[[LibGit2]]
deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"

[[LibSSH2_jll]]
deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"

[[Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libiconv_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "42b62845d70a619f063a7da093d995ec8e15e778"
uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531"
version = "1.16.1+1"

[[LinearAlgebra]]
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uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[LogExpFunctions]]
deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "946607f84feb96220f480e0422d3484c49c00239"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.19"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MacroTools]]
deps = ["Markdown", "Random"]
git-tree-sha1 = "42324d08725e200c23d4dfb549e0d5d89dede2d2"
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version = "0.5.10"

[[Markdown]]
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[[MbedTLS]]
deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "Random", "Sockets"]
git-tree-sha1 = "03a9b9718f5682ecb107ac9f7308991db4ce395b"
uuid = "739be429-bea8-5141-9913-cc70e7f3736d"
version = "1.1.7"

[[MbedTLS_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"

[[Missings]]
deps = ["DataAPI"]
git-tree-sha1 = "bf210ce90b6c9eed32d25dbcae1ebc565df2687f"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "1.0.2"

[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[Mocking]]
deps = ["Compat", "ExprTools"]
git-tree-sha1 = "c272302b22479a24d1cf48c114ad702933414f80"
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version = "0.7.5"

[[MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"

[[Mustache]]
deps = ["Printf", "Tables"]
git-tree-sha1 = "1e566ae913a57d0062ff1af54d2697b9344b99cd"
uuid = "ffc61752-8dc7-55ee-8c37-f3e9cdd09e70"
version = "1.0.14"

[[Mux]]
deps = ["AssetRegistry", "Base64", "HTTP", "Hiccup", "Pkg", "Sockets", "WebSockets"]
git-tree-sha1 = "82dfb2cead9895e10ee1b0ca37a01088456c4364"
uuid = "a975b10e-0019-58db-a62f-e48ff68538c9"
version = "0.7.6"

[[NaNMath]]
deps = ["OpenLibm_jll"]
git-tree-sha1 = "a7c3d1da1189a1c2fe843a3bfa04d18d20eb3211"
uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
version = "1.0.1"

[[NearestNeighbors]]
deps = ["Distances", "StaticArrays"]
git-tree-sha1 = "440165bf08bc500b8fe4a7be2dc83271a00c0716"
uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
version = "0.4.12"

[[NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"

[[OBOParse]]
deps = ["Printf", "Test"]
git-tree-sha1 = "6ddf08c167062eb949c2345ce4bfd6f63e4b20a3"
uuid = "afb48802-0cf5-5a61-b18d-a3da2e9c5fb6"
version = "0.0.1"

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