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"Filting marker for GAPIT.Genotype.View function ..." Error in seq.default(max(ns)/4 + 200, max(ns)/3, 200),bwrong # 'by' argument #135

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PollyRosy opened this issue Jul 15, 2024 · 1 comment
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"Filting marker for GAPIT.Genotype.View function ..." Error in seq.default(max(ns)/4 + 200, max(ns)/3, 200),bwrong # 'by' argument #135

PollyRosy opened this issue Jul 15, 2024 · 1 comment

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@PollyRosy
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I guess here the bug is something related with chromosome?
@PollyRosy PollyRosy changed the title "Filting marker for GAPIT.Genotype.View function ..." Error in seq.default(max(ns)/4 + 200, max(ns)/3, 200) "Filting marker for GAPIT.Genotype.View function ..." Error in seq.default(max(ns)/4 + 200, max(ns)/3, 200),bwrong # 'by' argument Jul 15, 2024
@jiabowang
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Yes. The GAPIT is a tool for the whole genome. So the data should be covered for the whole genome and there should be 100 markers as least in each chromosome.

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@jiabowang @PollyRosy