Stuck in [1] "GAPIT.RandomModel beginning..." [1] FALSE

[YangZituo]

Hi,
I run GAPIT to do GLM model.
"myGAPIT <- GAPIT(
Y=myY[,c(1,2)],
GD=myGD,
GM=myGM,
PCA.total=3,
model="GLM",
)"

The MLM model can run but the GLM model stuck in one step.
[1] "GAPIT before BLUP and BLUE"
[1] "GAPIT after BLUP and BLUE"
[1] "Exporting BLUP and Pred"
[1] "GLM.Salt_start5 has been analyzed successfully!"
[1] "The results are saved in the directory of C:/Users/zituo/Desktop/hybrid"
[1] "before ending GAPIT.Main"
[1] "GAPIT.RandomModel beginning..."
[1] FALSE

And then it stuck and no move.
Could you help it?

[jiabowang]

The number of significant markers in your GLM is very large value. So the random model can not hold these variables.
Please try other model or use Random.model=FASLE in your command line.