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Table of contents "waiting..." open-circle indicators never turn solid + do not go away after cell finishes running #14604

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lukelbd opened this issue May 27, 2023 · 7 comments
Open

Table of contents "waiting..." open-circle indicators never turn solid + do not go away after cell finishes running #14604

lukelbd opened this issue May 27, 2023 · 7 comments
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bug pkg:toc

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@lukelbd
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lukelbd commented May 27, 2023 •
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Description

Lately, I have been experiencing a strange + intermittent issue with the table of contents. The open circles used to indicate sections with cells that are pending execution do not turn into filled circles when they start running, and the open circles never go away after the cell has finished. Might be tricky to reproduce.

Here's a screenshot of what this looks like (note that nothing is running in this notebook).

Screenshot 2023-05-27 at 13 35 27

Reproduce

  1. Create a notebook with multiple sections
  2. Add time-consuming processes to each section (e.g. import time; time.sleep(10)).
  3. Open the table of contents pane
  4. Run every cell in the notebook
  5. Try randomly interrupting/restarting different processes

It seems to trigger after kernel interruptions, or maybe after ssh connections to the remote server are interrupted/restored.

Expected behavior

Open circles turn solid when the cell is actually running (not waiting), and circles disappear when finished.

Context

  • Operating System and version: Linux CentOS 7.9.2009
  • Browser and version: JupyterLab Desktop 3.6.2-1
  • JupyterLab version: 3.6.3
Command Line Output 
[I 2023-05-26 14:57:13.634 ServerApp] Starting buffering for 2dd0cc1e-7740-41e2-ad50-2f227988727f:12f93ea8-a8cb-47f6-8774-9b60631c7bd8
[W 2023-05-26 14:57:13.690 ServerApp] Replacing stale connection: 2dd0cc1e-7740-41e2-ad50-2f227988727f:12f93ea8-a8cb-47f6-8774-9b60631c7bd8
[E 2023-05-26 14:57:13.790 ServerApp] Uncaught exception GET /api/kernels/2dd0cc1e-7740-41e2-ad50-2f227988727f/channels?session_id=12f93ea8-a8cb-47f6-8774-9b60631c7bd8 (::1)
    HTTPServerRequest(protocol='http', host='localhost:3002', method='GET', uri='/api/kernels/2dd0cc1e-7740-41e2-ad50-2f227988727f/channels?session_id=12f93ea8-a8cb-47f6-8774-9b60631c7bd8', version='HTTP/1.1', remote_ip='::1')
    Traceback (most recent call last):
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/tornado/web.py", line 1786, in _execute
        result = await result
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/jupyter_server/services/kernels/websocket.py", line 67, in get
        await super().get(kernel_id=kernel_id)
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/tornado/websocket.py", line 272, in get
        await self.ws_connection.accept_connection(self)
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/tornado/websocket.py", line 862, in accept_connection
        await self._accept_connection(handler)
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/tornado/websocket.py", line 902, in _accept_connection
        self.selected_subprotocol = handler.select_subprotocol(subprotocols)
      File "/home/ldavis/miniconda3/lib/python3.10/site-packages/jupyter_server/services/kernels/websocket.py", line 86, in select_subprotocol
        preferred_protocol = self.connection.kernel_ws_protocol
    AttributeError: 'NoneType' object has no attribute 'kernel_ws_protocol'
[E 2023-05-26 14:57:13.954 ServerApp] {
      "Host": "localhost:3002",
      "User-Agent": "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/537.36 (KHTML, like Gecko) jupyterlab-desktop/3.6.2-1 Chrome/110.0.5481.192 Electron/23.1.4 Safari/537.36"
    }
[E 2023-05-26 14:57:13.959 ServerApp] 500 GET /api/kernels/2dd0cc1e-7740-41e2-ad50-2f227988727f/channels?session_id=12f93ea8-a8cb-47f6-8774-9b60631c7bd8 (c678a72794f646c984cbe408c474323e@::1) 308.69ms referer=None
Browser Output 
Paste the output from your browser Javascript console here, if applicable.
@lukelbd lukelbd added the bug label May 27, 2023
@jupyterlab-probot jupyterlab-probot bot added the status:Needs Triage Applied to new issues that need triage label May 27, 2023
@lukelbd
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lukelbd commented May 27, 2023

And here's jupyter troubleshoot output (github said it was too long to include in one post):

Troubleshoot Output 
$PATH:
        /home/ldavis/miniconda3/bin
        /home/ldavis/miniconda3/condabin
        /home/ldavis/models/ncparallel
        /home/ldavis/bin
        /home/ldavis/.local/bin
        /home/ldavis/.iterm2
        /home/ldavis/nvim/bin
        /home/ldavis/go/bin
        /home/ldavis/node/bin
        /home/ldavis/.deno/bin
        /opt/pgi/linux86-64/19.10/bin
        /usr/lib64/mpich/bin
        /usr/lib64/qt-3.3/bin
        /usr/local/bin
        /usr/bin
        /usr/local/sbin
        /usr/sbin
        /home/ldavis/.fzf/bin

sys.path:
        /home/ldavis/miniconda3/bin
        /home/ldavis/science/timescales
        /home/ldavis/science/constraints
        /home/ldavis/science/coupled
        /home/ldavis/science/idealized
        /home/ldavis/science/reanalysis-data
        /home/ldavis/science/cmip-data
        /home/ldavis/science/coupled/coupled
        /home/ldavis/miniconda3/lib/python310.zip
        /home/ldavis/miniconda3/lib/python3.10
        /home/ldavis/miniconda3/lib/python3.10/lib-dynload
        /home/ldavis/miniconda3/lib/python3.10/site-packages

sys.executable:
        /home/ldavis/miniconda3/bin/python

sys.version:
        3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:36:39) [GCC 10.4.0]

platform.platform():
        Linux-3.10.0-957.27.2.el7.x86_64-x86_64-with-glibc2.17

which -a jupyter:
        /home/ldavis/miniconda3/bin/jupyter

pip list:
        Package                         Version             Editable project location
        ------------------------------- ------------------- ---------------------------
        aiobotocore                     2.2.0
        aiofiles                        22.1.0
        aiohttp                         3.8.1
        aioitertools                    0.10.0
        aiosignal                       1.2.0
        aiosqlite                       0.19.0
        alabaster                       0.7.12
        antlr4-python3-runtime          4.7.2
        anyio                           3.6.2
        appdirs                         1.4.4
        argon2-cffi                     21.3.0
        argon2-cffi-bindings            21.2.0
        arrow                           1.2.3
        asn1crypto                      1.5.1
        astroid                         2.11.5
        asttokens                       2.0.5
        async-generator                 1.10
        async-lru                       2.0.2
        async-timeout                   4.0.2
        attrs                           21.4.0
        autopep8                        1.6.0
        Babel                           2.11.0
        backcall                        0.2.0
        backports.functools-lru-cache   1.6.4
        beautifulsoup4                  4.12.2
        black                           22.3.0
        bleach                          6.0.0
        bokeh                           2.4.3
        botocore                        1.24.21
        brotlipy                        0.7.0
        Cartopy                         0.20.2
        cattrs                          22.2.0
        cdo                             1.5.2
        certifi                         2023.5.7
        cf-units                        3.0.1
        cf-xarray                       0.7.5
        cffi                            1.15.0
        cfgv                            3.3.1
        cftime                          1.6.0
        charset-normalizer              2.0.12
        click                           8.1.3
        climopy                         0.1.0.post285+dirty /home/ldavis/coding/climopy
        cloudpickle                     2.0.0
        colorama                        0.4.4
        comm                            0.1.3
        conda                           4.12.0
        conda-package-handling          1.8.1
        condastats                      0.1.5
        cramjam                         2.5.0
        cryptography                    38.0.4
        cycler                          0.11.0
        cytoolz                         0.11.2
        dask                            2022.4.1
        dataclasses                     0.8
        debugpy                         1.6.7
        decorator                       5.1.1
        defusedxml                      0.7.1
        dill                            0.3.5.1
        distlib                         0.3.4
        distributed                     2022.4.1
        docker                          5.0.3
        docker-pycreds                  0.4.0
        docutils                        0.17.1
        entrypoints                     0.4
        esgf-pyclient                   0.3.1
        exceptiongroup                  1.0.4
        executing                       0.8.3
        fastjsonschema                  2.17.1
        fastparquet                     0.8.1
        filelock                        3.7.0
        flake8                          4.0.1
        flake8-unused-arguments         0.0.10
        flit_core                       3.9.0
        fonttools                       4.33.3
        fqdn                            1.5.1
        frozenlist                      1.3.0
        fsspec                          2022.3.0
        graphviz                        0.16
        greenlet                        1.1.2
        HeapDict                        1.0.1
        icecream                        2.1.3
        identify                        2.5.1
        idna                            3.3
        imagesize                       1.3.0
        importlib-metadata              4.11.3
        importlib-resources             5.7.1
        iniconfig                       1.1.1
        ipdb                            0.13.9
        ipykernel                       6.23.1
        ipython                         8.10.0
        ipython-genutils                0.2.0
        isoduration                     20.11.0
        isort                           5.10.1
        itsdangerous                    2.1.2
        jedi                            0.18.0
        Jinja2                          3.1.2
        jmespath                        1.0.1
        json5                           0.9.5
        jsonpointer                     2.3
        jsonschema                      4.17.3
        jupyter_client                  8.2.0
        jupyter-contrib-core            0.3.3
        jupyter-contrib-nbextensions    0.7.0
        jupyter_core                    5.3.0
        jupyter-events                  0.6.3
        jupyter-highlight-selected-word 0.2.0
        jupyter-lsp                     2.1.0
        jupyter_server                  2.5.0
        jupyter_server_fileid           0.9.0
        jupyter_server_terminals        0.4.4
        jupyter_server_ydoc             0.8.0
        jupyter-ydoc                    0.2.3
        jupyterlab                      3.6.3
        jupyterlab_code_formatter       2.2.1
        jupyterlab-lsp                  4.1.0
        jupyterlab-pygments             0.2.2
        jupyterlab_server               2.22.1
        kiwisolver                      1.4.2
        lazy-object-proxy               1.7.1
        libmambapy                      1.1.0
        locket                          1.0.0
        lxml                            4.8.0
        lz4                             4.0.0
        Magics                          1.5.6
        mamba                           1.1.0
        MarkupSafe                      2.1.1
        matplotlib                      3.4.3
        matplotlib-inline               0.1.3
        matplotlib-iterm2               0.1.0
        mccabe                          0.6.1
        MetPy                           1.3.0
        mistune                         2.0.5
        more-itertools                  8.12.0
        msgpack                         1.0.3
        multidict                       6.0.2
        munkres                         1.1.4
        MyProxyClient                   2.1.0
        mypy-extensions                 0.4.3
        nb-conda-kernels                2.3.1
        nbclassic                       1.0.0
        nbclient                        0.8.0
        nbconvert                       7.4.0
        nbformat                        5.8.0
        nco                             1.0.0
        nest-asyncio                    1.5.6
        netCDF4                         1.5.8
        nodeenv                         1.6.0
        notebook                        6.5.4
        notebook_shim                   0.2.3
        numpy                           1.22.3
        olefile                         0.46
        packaging                       21.3
        pandas                          1.4.2
        pandocfilters                   1.5.0
        parso                           0.8.3
        partd                           1.2.0
        pathspec                        0.9.0
        patsy                           0.5.2
        pexpect                         4.8.0
        pickleshare                     0.7.5
        Pillow                          9.1.1
        Pint                            0.19.2
        pint-xarray                     0.2.1
        pip                             22.0.4
        pkgutil_resolve_name            1.3.10
        platformdirs                    2.5.1
        pluggy                          1.0.0
        pooch                           1.6.0
        pre-commit                      2.19.0
        prometheus-client               0.16.0
        prompt-toolkit                  3.0.36
        proplot                         0.9.5.post341+dirty /home/ldavis/coding/proplot
        psutil                          5.9.0
        ptyprocess                      0.7.0
        pure-eval                       0.2.2
        py                              1.11.0
        pycodestyle                     2.8.0
        pycosat                         0.6.3
        pycparser                       2.21
        pydocstyle                      6.1.1
        pydot                           1.4.2
        pyepsg                          0.4.0
        pyflakes                        2.4.0
        Pygments                        2.12.0
        pyke                            1.1.1
        pylint                          2.13.9
        pynvim                          0.4.3
        pyOpenSSL                       22.0.0
        pyparsing                       3.0.8
        pyproj                          3.3.0
        PyQt5                           5.12.3
        PyQt5_sip                       4.19.18
        PyQtChart                       5.12
        PyQtWebEngine                   5.12.1
        pyrsistent                      0.19.3
        pyshp                           2.2.0
        PySocks                         1.7.1
        pytest                          7.1.2
        python-dateutil                 2.8.2
        python-json-logger              2.0.7
        python-lsp-jsonrpc              1.0.0
        python-lsp-server               1.4.1
        python-snappy                   0.6.0
        pytz                            2022.1
        PyYAML                          6.0
        pyzmq                           25.0.2
        regex                           2022.4.24
        requests                        2.28.2
        requests-cache                  0.9.6
        rfc3339-validator               0.1.4
        rfc3986-validator               0.1.1
        rope                            1.1.1
        ruamel-yaml-conda               0.15.80
        s3fs                            2022.3.0
        scipy                           1.8.0
        seaborn                         0.12.1
        Send2Trash                      1.8.2
        setuptools                      62.3.2
        Shapely                         1.8.2
        simplejson                      3.17.6
        six                             1.16.0
        sniffio                         1.3.0
        snowballstemmer                 2.2.0
        sortedcontainers                2.4.0
        soupsieve                       2.3.2.post1
        Sphinx                          4.5.0
        sphinxcontrib-applehelp         1.0.2
        sphinxcontrib-devhelp           1.0.2
        sphinxcontrib-htmlhelp          2.0.0
        sphinxcontrib-jsmath            1.0.1
        sphinxcontrib-qthelp            1.0.3
        sphinxcontrib-serializinghtml   1.1.5
        stack-data                      0.2.0
        statsmodels                     0.13.2
        tblib                           1.7.0
        terminado                       0.17.1
        testpath                        0.6.0
        tinycss2                        1.2.1
        toml                            0.10.2
        tomli                           2.0.1
        toolz                           0.11.2
        tornado                         6.3.2
        tqdm                            4.64.0
        traitlets                       5.9.0
        typed-ast                       1.5.3
        typing_extensions               4.2.0
        ujson                           5.3.0
        ukkonen                         1.0.1
        unicodedata2                    14.0.0
        uri-template                    1.2.0
        url-normalize                   1.4.3
        urllib3                         1.26.9
        virtualenv                      20.14.1
        wcwidth                         0.2.5
        webcolors                       1.13
        webencodings                    0.5.1
        WebOb                           1.8.7
        websocket-client                1.3.2
        wheel                           0.37.1
        wrapt                           1.14.1
        xarray                          0.21.1
        y-py                            0.5.9
        yapf                            0.32.0
        yarl                            1.7.2
        ypy-websocket                   0.8.2
        zict                            2.2.0
        zipp                            3.8.0

conda list:
        # packages in environment at /home/ldavis/miniconda3:
        #
        # Name                    Version                   Build  Channel
        _go_select                2.3.0                       cgo    conda-forge
        _libgcc_mutex             0.1                 conda_forge    conda-forge
        _openmp_mutex             4.5                       2_gnu    conda-forge
        aiobotocore               2.2.0              pyhd8ed1ab_0    conda-forge
        aiofiles                  22.1.0             pyhd8ed1ab_0    conda-forge
        aiohttp                   3.8.1           py310h5764c6d_1    conda-forge
        aioitertools              0.10.0             pyhd8ed1ab_0    conda-forge
        aiosignal                 1.2.0              pyhd8ed1ab_0    conda-forge
        aiosqlite                 0.19.0             pyhd8ed1ab_0    conda-forge
        alabaster                 0.7.12                     py_0    conda-forge
        alsa-lib                  1.2.3                h516909a_0    conda-forge
        antlr-python-runtime      4.7.2           py310hff52083_1003    conda-forge
        anyio                     3.6.2              pyhd8ed1ab_0    conda-forge
        appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
        argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
        argon2-cffi-bindings      21.2.0          py310h5764c6d_3    conda-forge
        arrow                     1.2.3                    pypi_0    pypi
        asn1crypto                1.5.1              pyhd8ed1ab_0    conda-forge
        astroid                   2.11.5          py310hff52083_0    conda-forge
        asttokens                 2.0.5              pyhd8ed1ab_0    conda-forge
        async-lru                 2.0.2                    pypi_0    pypi
        async-timeout             4.0.2              pyhd8ed1ab_0    conda-forge
        async_generator           1.10                       py_0    conda-forge
        atk                       2.36.0               ha770c72_4    conda-forge
        atk-1.0                   2.36.0               h3371d22_4    conda-forge
        attrs                     21.4.0             pyhd8ed1ab_0    conda-forge
        autopep8                  1.6.0              pyhd8ed1ab_1    conda-forge
        babel                     2.11.0             pyhd8ed1ab_0    conda-forge
        backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
        backports                 1.0                        py_2    conda-forge
        backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
        beautifulsoup4            4.12.2             pyha770c72_0    conda-forge
        black                     22.3.0             pyhd8ed1ab_0    conda-forge
        bleach                    6.0.0              pyhd8ed1ab_0    conda-forge
        bokeh                     2.4.3           py310hff52083_0    conda-forge
        boost-cpp                 1.74.0               h6cacc03_7    conda-forge
        botocore                  1.24.21            pyhd8ed1ab_1    conda-forge
        brotli                    1.0.9                h166bdaf_7    conda-forge
        brotli-bin                1.0.9                h166bdaf_7    conda-forge
        brotlipy                  0.7.0           py310h5764c6d_1004    conda-forge
        bzip2                     1.0.8                h7f98852_4    conda-forge
        c-ares                    1.18.1               h7f98852_0    conda-forge
        ca-certificates           2023.5.7             hbcca054_0    conda-forge
        cairo                     1.16.0            ha12eb4b_1010    conda-forge
        cartopy                   0.20.2          py310he9c7799_3    conda-forge
        cattrs                    22.2.0             pyhd8ed1ab_0    conda-forge
        cdo                       1.5.2                    pypi_0    pypi
        certifi                   2023.5.7           pyhd8ed1ab_0    conda-forge
        cf-units                  3.0.1           py310h96516ba_2    conda-forge
        cf-xarray                 0.7.5                    pypi_0    pypi
        cffi                      1.15.0          py310h0fdd8cc_0    conda-forge
        cfgv                      3.3.1              pyhd8ed1ab_0    conda-forge
        cftime                    1.6.0           py310hde88566_1    conda-forge
        charset-normalizer        2.0.12             pyhd8ed1ab_0    conda-forge
        click                     8.1.3           py310hff52083_0    conda-forge
        climopy                   0.1.0.post285+dirty          pypi_0    pypi
        cloudpickle               2.0.0              pyhd8ed1ab_0    conda-forge
        colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
        comm                      0.1.3              pyhd8ed1ab_0    conda-forge
        conda                     4.12.0          py310hff52083_0    conda-forge
        conda-package-handling    1.8.1           py310h5764c6d_1    conda-forge
        condastats                0.1.5              pyhd8ed1ab_1    conda-forge
        cramjam                   2.5.0           py310hddbf208_0    conda-forge
        cryptography              38.0.4          py310h600f1e7_0    conda-forge
        curl                      7.86.0               h2283fc2_1    conda-forge
        cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
        cytoolz                   0.11.2          py310h5764c6d_2    conda-forge
        dask                      2022.4.1           pyhd8ed1ab_0    conda-forge
        dask-core                 2022.4.1           pyhd8ed1ab_0    conda-forge
        dataclasses               0.8                pyhc8e2a94_3    conda-forge
        dbus                      1.13.6               hfdff14a_1    conda-forge
        debugpy                   1.6.7           py310heca2aa9_0    conda-forge
        decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
        defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
        deno                      1.29.2               h0f5d50b_0    conda-forge
        dill                      0.3.5.1            pyhd8ed1ab_0    conda-forge
        distlib                   0.3.4              pyhd8ed1ab_0    conda-forge
        distributed               2022.4.1           pyhd8ed1ab_0    conda-forge
        docker-py                 5.0.3           py310hff52083_2    conda-forge
        docker-pycreds            0.4.0                      py_0    conda-forge
        docutils                  0.17.1          py310hff52083_2    conda-forge
        eccodes                   2.25.0               hc08acdf_0    conda-forge
        entrypoints               0.4                pyhd8ed1ab_0    conda-forge
        esgf-pyclient             0.3.1              pyh1a96a4e_2    conda-forge
        esmf                      8.2.0           nompi_h61edca3_0    conda-forge
        exceptiongroup            1.0.4              pyhd8ed1ab_0    conda-forge
        executing                 0.8.3              pyhd8ed1ab_0    conda-forge
        expat                     2.5.0                h27087fc_0    conda-forge
        fastparquet               0.8.1           py310hde88566_0    conda-forge
        fftw                      3.3.10          nompi_h77c792f_102    conda-forge
        filelock                  3.7.0              pyhd8ed1ab_0    conda-forge
        flake8                    4.0.1              pyhd8ed1ab_2    conda-forge
        flake8-unused-arguments   0.0.10                   pypi_0    pypi
        flit-core                 3.9.0              pyhd8ed1ab_0    conda-forge
        fmt                       9.1.0                h924138e_0    conda-forge
        font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
        font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
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        tqdm                      4.64.0             pyhd8ed1ab_0    conda-forge
        traitlets                 5.9.0              pyhd8ed1ab_0    conda-forge
        typed-ast                 1.5.3           py310h5764c6d_0    conda-forge
        typing-extensions         4.2.0                hd8ed1ab_1    conda-forge
        typing_extensions         4.2.0              pyha770c72_1    conda-forge
        tzdata                    2022a                h191b570_0    conda-forge
        udunits2                  2.2.28               hc3e0081_0    conda-forge
        ujson                     5.3.0           py310hd8f1fbe_0    conda-forge
        ukkonen                   1.0.1           py310hbf28c38_2    conda-forge
        unicodedata2              14.0.0          py310h5764c6d_1    conda-forge
        uri-template              1.2.0                    pypi_0    pypi
        url-normalize             1.4.3              pyhd8ed1ab_0    conda-forge
        urllib3                   1.26.9             pyhd8ed1ab_0    conda-forge
        vim                       9.0.1425        py310pl5321he38944a_0    conda-forge
        virtualenv                20.14.1         py310hff52083_0    conda-forge
        wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
        webcolors                 1.13                     pypi_0    pypi
        webencodings              0.5.1                      py_1    conda-forge
        webob                     1.8.7              pyhd8ed1ab_0    conda-forge
        websocket-client          1.3.2              pyhd8ed1ab_0    conda-forge
        wget                      1.20.3               ha35d2d1_1    conda-forge
        wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
        wrapt                     1.14.1          py310h5764c6d_0    conda-forge
        xarray                    0.21.1             pyhd8ed1ab_0    conda-forge
        xorg-fixesproto           5.0               h7f98852_1002    conda-forge
        xorg-inputproto           2.3.2             h7f98852_1002    conda-forge
        xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
        xorg-libice               1.0.10               h7f98852_0    conda-forge
        xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
        xorg-libx11               1.8.4                h0b41bf4_0    conda-forge
        xorg-libxau               1.0.9                h7f98852_0    conda-forge
        xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
        xorg-libxext              1.3.4                h7f98852_1    conda-forge
        xorg-libxfixes            5.0.3             h7f98852_1004    conda-forge
        xorg-libxi                1.7.10               h7f98852_0    conda-forge
        xorg-libxpm               3.5.13               h7f98852_0    conda-forge
        xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
        xorg-libxt                1.2.1                h7f98852_2    conda-forge
        xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
        xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
        xorg-xproto               7.0.31            h7f98852_1007    conda-forge
        xz                        5.2.6                h166bdaf_0    conda-forge
        y-py                      0.5.9           py310h4426083_0    conda-forge
        yaml                      0.2.5                h7f98852_2    conda-forge
        yaml-cpp                  0.7.0                h27087fc_2    conda-forge
        yapf                      0.32.0             pyhd8ed1ab_0    conda-forge
        yarl                      1.7.2           py310h5764c6d_2    conda-forge
        ypy-websocket             0.8.2              pyhd8ed1ab_0    conda-forge
        zeromq                    4.3.4                h9c3ff4c_1    conda-forge
        zict                      2.2.0              pyhd8ed1ab_0    conda-forge
        zipp                      3.8.0              pyhd8ed1ab_0    conda-forge
        zlib                      1.2.13               h166bdaf_4    conda-forge
        zstd                      1.5.2                ha95c52a_0    conda-forge

conda env:
        name: base
        channels:
          - conda-forge
        dependencies:
          - _go_select=2.3.0=cgo
          - _libgcc_mutex=0.1=conda_forge
          - _openmp_mutex=4.5=2_gnu
          - aiobotocore=2.2.0=pyhd8ed1ab_0
          - aiofiles=22.1.0=pyhd8ed1ab_0
          - aiohttp=3.8.1=py310h5764c6d_1
          - aioitertools=0.10.0=pyhd8ed1ab_0
          - aiosignal=1.2.0=pyhd8ed1ab_0
          - aiosqlite=0.19.0=pyhd8ed1ab_0
          - alabaster=0.7.12=py_0
          - alsa-lib=1.2.3=h516909a_0
          - antlr-python-runtime=4.7.2=py310hff52083_1003
          - anyio=3.6.2=pyhd8ed1ab_0
          - appdirs=1.4.4=pyh9f0ad1d_0
          - argon2-cffi=21.3.0=pyhd8ed1ab_0
          - argon2-cffi-bindings=21.2.0=py310h5764c6d_3
          - asn1crypto=1.5.1=pyhd8ed1ab_0
          - astroid=2.11.5=py310hff52083_0
          - asttokens=2.0.5=pyhd8ed1ab_0
          - async-timeout=4.0.2=pyhd8ed1ab_0
          - async_generator=1.10=py_0
          - atk=2.36.0=ha770c72_4
          - atk-1.0=2.36.0=h3371d22_4
          - attrs=21.4.0=pyhd8ed1ab_0
          - autopep8=1.6.0=pyhd8ed1ab_1
          - babel=2.11.0=pyhd8ed1ab_0
          - backcall=0.2.0=pyh9f0ad1d_0
          - backports=1.0=py_2
          - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
          - beautifulsoup4=4.12.2=pyha770c72_0
          - black=22.3.0=pyhd8ed1ab_0
          - bleach=6.0.0=pyhd8ed1ab_0
          - bokeh=2.4.3=py310hff52083_0
          - boost-cpp=1.74.0=h6cacc03_7
          - botocore=1.24.21=pyhd8ed1ab_1
          - brotli=1.0.9=h166bdaf_7
          - brotli-bin=1.0.9=h166bdaf_7
          - brotlipy=0.7.0=py310h5764c6d_1004
          - bzip2=1.0.8=h7f98852_4
          - c-ares=1.18.1=h7f98852_0
          - ca-certificates=2023.5.7=hbcca054_0
          - cairo=1.16.0=ha12eb4b_1010
          - cartopy=0.20.2=py310he9c7799_3
          - cattrs=22.2.0=pyhd8ed1ab_0
          - certifi=2023.5.7=pyhd8ed1ab_0
          - cf-units=3.0.1=py310h96516ba_2
          - cffi=1.15.0=py310h0fdd8cc_0
          - cfgv=3.3.1=pyhd8ed1ab_0
          - cftime=1.6.0=py310hde88566_1
          - charset-normalizer=2.0.12=pyhd8ed1ab_0
          - click=8.1.3=py310hff52083_0
          - cloudpickle=2.0.0=pyhd8ed1ab_0
          - colorama=0.4.4=pyh9f0ad1d_0
          - comm=0.1.3=pyhd8ed1ab_0
          - conda=4.12.0=py310hff52083_0
          - conda-package-handling=1.8.1=py310h5764c6d_1
          - condastats=0.1.5=pyhd8ed1ab_1
          - cramjam=2.5.0=py310hddbf208_0
          - cryptography=38.0.4=py310h600f1e7_0
          - curl=7.86.0=h2283fc2_1
          - cycler=0.11.0=pyhd8ed1ab_0
          - cytoolz=0.11.2=py310h5764c6d_2
          - dask=2022.4.1=pyhd8ed1ab_0
          - dask-core=2022.4.1=pyhd8ed1ab_0
          - dataclasses=0.8=pyhc8e2a94_3
          - dbus=1.13.6=hfdff14a_1
          - debugpy=1.6.7=py310heca2aa9_0
          - decorator=5.1.1=pyhd8ed1ab_0
          - defusedxml=0.7.1=pyhd8ed1ab_0
          - deno=1.29.2=h0f5d50b_0
          - dill=0.3.5.1=pyhd8ed1ab_0
          - distlib=0.3.4=pyhd8ed1ab_0
          - distributed=2022.4.1=pyhd8ed1ab_0
          - docker-py=5.0.3=py310hff52083_2
          - docker-pycreds=0.4.0=py_0
          - docutils=0.17.1=py310hff52083_2
          - eccodes=2.25.0=hc08acdf_0
          - entrypoints=0.4=pyhd8ed1ab_0
          - esgf-pyclient=0.3.1=pyh1a96a4e_2
          - esmf=8.2.0=nompi_h61edca3_0
          - exceptiongroup=1.0.4=pyhd8ed1ab_0
          - executing=0.8.3=pyhd8ed1ab_0
          - expat=2.5.0=h27087fc_0
          - fastparquet=0.8.1=py310hde88566_0
          - fftw=3.3.10=nompi_h77c792f_102
          - filelock=3.7.0=pyhd8ed1ab_0
          - flake8=4.0.1=pyhd8ed1ab_2
          - flit-core=3.9.0=pyhd8ed1ab_0
          - fmt=9.1.0=h924138e_0
          - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
          - font-ttf-inconsolata=3.000=h77eed37_0
          - font-ttf-source-code-pro=2.038=h77eed37_0
          - font-ttf-ubuntu=0.83=hab24e00_0
          - fontconfig=2.14.0=h8e229c2_0
          - fonts-conda-ecosystem=1=0
          - fonts-conda-forge=1=0
          - fonttools=4.33.3=py310h5764c6d_0
          - freeglut=3.2.2=h9c3ff4c_1
          - freetype=2.10.4=h0708190_1
          - fribidi=1.0.10=h36c2ea0_0
          - frozenlist=1.3.0=py310h5764c6d_1
          - fsspec=2022.3.0=pyhd8ed1ab_0
          - g-ir-build-tools=1.72.0=py310h2f29349_1
          - g-ir-host-tools=1.72.0=h1def2ed_1
          - gdk-pixbuf=2.42.6=h04a7f16_0
          - geos=3.10.2=h9c3ff4c_0
          - gettext=0.21.1=h27087fc_0
          - giflib=5.2.1=h36c2ea0_2
          - git=2.39.0=pl5321h693f4a3_0
          - glib=2.70.2=h780b84a_4
          - glib-tools=2.70.2=h780b84a_4
          - gmp=6.2.1=h58526e2_0
          - go=1.17.7=h17d2266_0
          - gobject-introspection=1.72.0=py310h964465f_1
          - graphite2=1.3.13=h58526e2_1001
          - graphviz=2.49.1=h85b4f2f_0
          - gsl=2.7=he838d99_0
          - gst-plugins-base=1.18.5=hf529b03_0
          - gstreamer=1.18.5=h76c114f_0
          - gtk2=2.24.33=h539f30e_1
          - gts=0.7.6=h1fc3fae_2
          - harfbuzz=3.4.0=hb4a5f5f_0
          - hdf4=4.2.15=h10796ff_3
          - hdf5=1.12.1=nompi_h4df4325_104
          - heapdict=1.0.1=py_0
          - icu=69.1=h9c3ff4c_0
          - identify=2.5.1=pyhd8ed1ab_0
          - idna=3.3=pyhd8ed1ab_0
          - imagesize=1.3.0=pyhd8ed1ab_0
          - importlib-metadata=4.11.3=py310hff52083_1
          - importlib_metadata=4.11.3=hd8ed1ab_1
          - importlib_resources=5.7.1=pyhd8ed1ab_0
          - iniconfig=1.1.1=pyh9f0ad1d_0
          - ipdb=0.13.9=pyhd8ed1ab_0
          - ipykernel=6.23.1=pyh210e3f2_0
          - ipython=8.10.0=pyh41d4057_0
          - ipython_genutils=0.2.0=py_1
          - isort=5.10.1=pyhd8ed1ab_0
          - itsdangerous=2.1.2=pyhd8ed1ab_0
          - jasper=2.0.33=ha77e612_0
          - jbig=2.1=h7f98852_2003
          - jedi=0.18.0=py310hff52083_3
          - jinja2=3.1.2=pyhd8ed1ab_1
          - jmespath=1.0.1=pyhd8ed1ab_0
          - jpeg=9e=h166bdaf_1
          - json5=0.9.5=pyh9f0ad1d_0
          - jsonschema=4.17.3=pyhd8ed1ab_0
          - jupyter-lsp=2.1.0=pyhd8ed1ab_0
          - jupyter_client=8.2.0=pyhd8ed1ab_0
          - jupyter_core=5.3.0=py310hff52083_0
          - jupyter_events=0.6.3=pyhd8ed1ab_0
          - jupyter_server=2.5.0=pyhd8ed1ab_0
          - jupyter_server_fileid=0.9.0=pyhd8ed1ab_0
          - jupyter_server_terminals=0.4.4=pyhd8ed1ab_1
          - jupyter_server_ydoc=0.8.0=pyhd8ed1ab_0
          - jupyter_ydoc=0.2.3=pyhd8ed1ab_0
          - jupyterlab=3.6.3=pyhd8ed1ab_0
          - jupyterlab-lsp=4.1.0=pyhd8ed1ab_0
          - jupyterlab_code_formatter=2.2.1=pyhd8ed1ab_0
          - jupyterlab_pygments=0.2.2=pyhd8ed1ab_0
          - jupyterlab_server=2.22.1=pyhd8ed1ab_0
          - keyutils=1.6.1=h166bdaf_0
          - kiwisolver=1.4.2=py310hbf28c38_1
          - krb5=1.19.3=h08a2579_0
          - lazy-object-proxy=1.7.1=py310h5764c6d_1
          - lcms2=2.12=hddcbb42_0
          - ld_impl_linux-64=2.36.1=hea4e1c9_2
          - lerc=3.0=h9c3ff4c_0
          - lftp=4.9.2=hedb13fd_1
          - libaec=1.0.6=h9c3ff4c_0
          - libarchive=3.5.2=hed592e5_1
          - libblas=3.9.0=14_linux64_openblas
          - libbrotlicommon=1.0.9=h166bdaf_7
          - libbrotlidec=1.0.9=h166bdaf_7
          - libbrotlienc=1.0.9=h166bdaf_7
          - libcblas=3.9.0=14_linux64_openblas
          - libclang=13.0.1=default_hc23dcda_0
          - libcurl=7.86.0=h2283fc2_1
          - libdeflate=1.10=h7f98852_0
          - libedit=3.1.20191231=he28a2e2_2
          - libev=4.33=h516909a_1
          - libevent=2.1.10=h28343ad_4
          - libffi=3.4.2=h7f98852_5
          - libgcc-ng=12.1.0=h8d9b700_16
          - libgd=2.3.3=h283352f_2
          - libgfortran-ng=11.2.0=h69a702a_16
          - libgfortran5=11.2.0=h5c6108e_16
          - libgirepository=1.72.0=h26ff761_1
          - libglib=2.70.2=h174f98d_4
          - libglu=9.0.0=he1b5a44_1001
          - libgomp=12.1.0=h8d9b700_16
          - libiconv=1.17=h166bdaf_0
          - libidn2=2.3.2=h7f98852_0
          - liblapack=3.9.0=14_linux64_openblas
          - libllvm11=11.1.0=hf817b99_3
          - libllvm13=13.0.1=hf817b99_2
          - libllvm9=9.0.1=default_hc23dcda_7
          - libmamba=1.1.0=h70b1f8a_2
          - libmambapy=1.1.0=py310h69aa5bf_2
          - libnetcdf=4.8.1=nompi_h329d8a1_102
          - libnghttp2=1.47.0=hff17c54_1
          - libnsl=2.0.0=h7f98852_0
          - libogg=1.3.4=h7f98852_1
          - libopenblas=0.3.20=pthreads_h78a6416_0
          - libopus=1.3.1=h7f98852_1
          - libpng=1.6.37=h21135ba_2
          - libpq=14.5=h52d0468_3
          - librsvg=2.52.2=hc3c00ef_0
          - libsodium=1.0.18=h36c2ea0_1
          - libsolv=0.7.22=h6239696_0
          - libsqlite=3.39.4=h753d276_0
          - libssh2=1.10.0=hf14f497_3
          - libstdcxx-ng=12.2.0=h46fd767_19
          - libtiff=4.3.0=h542a066_3
          - libtool=2.4.6=h9c3ff4c_1008
          - libunistring=0.9.10=h7f98852_0
          - libuuid=2.32.1=h7f98852_1000
          - libuv=1.43.0=h7f98852_0
          - libvorbis=1.3.7=h9c3ff4c_0
          - libwebp=1.2.2=h3452ae3_0
          - libwebp-base=1.2.2=h7f98852_1
          - libxcb=1.13=h7f98852_1004
          - libxkbcommon=1.0.3=he3ba5ed_0
          - libxml2=2.9.12=h885dcf4_1
          - libxslt=1.1.33=h0ef7038_3
          - libzip=1.9.2=hc929e4a_1
          - libzlib=1.2.13=h166bdaf_4
          - locket=1.0.0=pyhd8ed1ab_0
          - lxml=4.8.0=py310h5764c6d_2
          - lz4=4.0.0=py310h5d5e884_2
          - lz4-c=1.9.3=h9c3ff4c_1
          - lzo=2.10=h516909a_1000
          - magics=4.10.0=hb6baf3b_1
          - magics-python=1.5.6=pyhd8ed1ab_0
          - mamba=1.1.0=py310h51d5547_2
          - markupsafe=2.1.1=py310h5764c6d_1
          - matplotlib=3.4.3=py310hff52083_2
          - matplotlib-base=3.4.3=py310h23f4a51_2
          - matplotlib-inline=0.1.3=pyhd8ed1ab_0
          - mccabe=0.6.1=py_1
          - metpy=1.3.0=pyhd8ed1ab_0
          - more-itertools=8.12.0=pyhd8ed1ab_0
          - mpfr=4.1.0=h9202a9a_1
          - msgpack-python=1.0.3=py310hbf28c38_1
          - multidict=6.0.2=py310h5764c6d_1
          - munkres=1.1.4=pyh9f0ad1d_0
          - myproxyclient=2.1.0=pyhd8ed1ab_2
          - mypy_extensions=0.4.3=py310hff52083_5
          - mysql-common=8.0.31=h26416b9_0
          - mysql-libs=8.0.31=hbc51c84_0
          - nb_conda_kernels=2.3.1=py310hff52083_2
          - nbclassic=1.0.0=pyhb4ecaf3_1
          - nbconvert-core=7.4.0=pyhd8ed1ab_0
          - nbconvert-pandoc=7.4.0=pyhd8ed1ab_0
          - nbformat=5.8.0=pyhd8ed1ab_0
          - nco=5.0.6=hcfc2ecc_0
          - ncurses=6.3=h27087fc_1
          - nest-asyncio=1.5.6=pyhd8ed1ab_0
          - netcdf-fortran=4.5.4=nompi_h2b6e579_100
          - netcdf4=1.5.8=nompi_py310hd7ca5b8_101
          - nodeenv=1.6.0=pyhd8ed1ab_0
          - nodejs=17.8.0=hfba9c51_0
          - notebook=6.5.4=pyha770c72_0
          - notebook-shim=0.2.3=pyhd8ed1ab_0
          - nspr=4.32=h9c3ff4c_1
          - nss=3.77=h2350873_0
          - numpy=1.22.3=py310h4ef5377_2
          - olefile=0.46=pyh9f0ad1d_1
          - openjpeg=2.4.0=hb52868f_1
          - openssl=3.1.0=hd590300_3
          - ossuuid=1.6.2=hf484d3e_1000
          - packaging=21.3=pyhd8ed1ab_0
          - pandas=1.4.2=py310h769672d_1
          - pandoc=2.19.2=h32600fe_2
          - pandocfilters=1.5.0=pyhd8ed1ab_0
          - pango=1.48.10=h54213e6_2
          - parso=0.8.3=pyhd8ed1ab_0
          - partd=1.2.0=pyhd8ed1ab_0
          - pathspec=0.9.0=pyhd8ed1ab_0
          - patsy=0.5.2=pyhd8ed1ab_0
          - pcre=8.45=h9c3ff4c_0
          - pcre2=10.40=hc3806b6_0
          - perl=5.32.1=2_h7f98852_perl5
          - pexpect=4.8.0=pyh9f0ad1d_2
          - pickleshare=0.7.5=py_1003
          - pillow=9.1.1=py310he619898_0
          - pint=0.19.2=pyhd8ed1ab_0
          - pint-xarray=0.2.1=pyhd8ed1ab_0
          - pip=22.0.4=pyhd8ed1ab_0
          - pixman=0.40.0=h36c2ea0_0
          - pkg-config=0.29.2=h36c2ea0_1008
          - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
          - platformdirs=2.5.1=pyhd8ed1ab_0
          - pluggy=1.0.0=py310hff52083_3
          - pooch=1.6.0=pyhd8ed1ab_0
          - poppler=22.04.0=h1434ded_0
          - poppler-data=0.4.11=hd8ed1ab_0
          - pre-commit=2.19.0=py310hff52083_0
          - proj=8.2.1=h277dcde_0
          - prometheus_client=0.16.0=pyhd8ed1ab_0
          - prompt-toolkit=3.0.36=pyha770c72_0
          - psutil=5.9.0=py310h5764c6d_1
          - pthread-stubs=0.4=h36c2ea0_1001
          - ptyprocess=0.7.0=pyhd3deb0d_0
          - pure_eval=0.2.2=pyhd8ed1ab_0
          - py=1.11.0=pyh6c4a22f_0
          - pybind11-abi=4=hd8ed1ab_3
          - pycodestyle=2.8.0=pyhd8ed1ab_0
          - pycosat=0.6.3=py310h5764c6d_1010
          - pycparser=2.21=pyhd8ed1ab_0
          - pydocstyle=6.1.1=pyhd8ed1ab_0
          - pydot=1.4.2=py310hff52083_1
          - pyepsg=0.4.0=py_0
          - pyflakes=2.4.0=pyhd8ed1ab_0
          - pygments=2.12.0=pyhd8ed1ab_0
          - pyke=1.1.1=pyhd8ed1ab_1004
          - pylint=2.13.9=pyhd8ed1ab_1
          - pynco=1.0.0=py_1
          - pyopenssl=22.0.0=pyhd8ed1ab_0
          - pyparsing=3.0.8=pyhd8ed1ab_0
          - pyproj=3.3.0=py310h9e0d750_1
          - pyqt=5.12.3=py310hff52083_8
          - pyqt-impl=5.12.3=py310h1f8e252_8
          - pyqt5-sip=4.19.18=py310h122e73d_8
          - pyqtchart=5.12=py310hfcd6d55_8
          - pyqtwebengine=5.12.1=py310hfcd6d55_8
          - pyrsistent=0.19.3=py310h1fa729e_0
          - pyshp=2.2.0=pyhd8ed1ab_0
          - pysocks=1.7.1=py310hff52083_5
          - pytest=7.1.2=py310hff52083_0
          - python=3.10.6=ha86cf86_0_cpython
          - python-dateutil=2.8.2=pyhd8ed1ab_0
          - python-fastjsonschema=2.17.1=pyhd8ed1ab_0
          - python-graphviz=0.16=pyhd3deb0d_1
          - python-json-logger=2.0.7=pyhd8ed1ab_0
          - python-lsp-jsonrpc=1.0.0=pyhd8ed1ab_0
          - python-lsp-server=1.4.1=pyhd8ed1ab_1
          - python-snappy=0.6.0=py310hcee4d7c_2
          - python_abi=3.10=2_cp310
          - pytz=2022.1=pyhd8ed1ab_0
          - pyyaml=6.0=py310h5764c6d_4
          - pyzmq=25.0.2=py310h059b190_0
          - qt=5.12.9=ha98a1a1_5
          - readline=8.1.2=h0f457ee_0
          - regex=2022.4.24=py310h5764c6d_0
          - reproc=14.2.3=h7f98852_0
          - reproc-cpp=14.2.3=h9c3ff4c_0
          - requests=2.28.2=pyhd8ed1ab_0
          - requests-cache=0.9.6=pyhd8ed1ab_0
          - requests_cache=0.4.13=py_0
          - rfc3339-validator=0.1.4=pyhd8ed1ab_0
          - rfc3986-validator=0.1.1=pyh9f0ad1d_0
          - rope=1.1.1=pyhd8ed1ab_0
          - ruamel_yaml=0.15.80=py310h6acc77f_1006
          - s3fs=2022.3.0=pyhd8ed1ab_0
          - scipy=1.8.0=py310hea5193d_1
          - seaborn=0.12.1=hd8ed1ab_0
          - seaborn-base=0.12.1=pyhd8ed1ab_0
          - send2trash=1.8.2=pyh41d4057_0
          - setuptools=62.3.2=py310hff52083_0
          - shapely=1.8.2=py310hb974679_1
          - shellcheck=0.8.0=ha770c72_0
          - simplejson=3.17.6=py310h5764c6d_1
          - six=1.16.0=pyh6c4a22f_0
          - snappy=1.1.9=hbd366e4_1
          - sniffio=1.3.0=pyhd8ed1ab_0
          - snowballstemmer=2.2.0=pyhd8ed1ab_0
          - sortedcontainers=2.4.0=pyhd8ed1ab_0
          - soupsieve=2.3.2.post1=pyhd8ed1ab_0
          - sphinx=4.5.0=pyh6c4a22f_0
          - sphinxcontrib-applehelp=1.0.2=py_0
          - sphinxcontrib-devhelp=1.0.2=py_0
          - sphinxcontrib-htmlhelp=2.0.0=pyhd8ed1ab_0
          - sphinxcontrib-jsmath=1.0.1=py_0
          - sphinxcontrib-qthelp=1.0.3=py_0
          - sphinxcontrib-serializinghtml=1.1.5=pyhd8ed1ab_2
          - sqlite=3.38.2=h4ff8645_0
          - stack_data=0.2.0=pyhd8ed1ab_0
          - statsmodels=0.13.2=py310hde88566_0
          - tblib=1.7.0=pyhd8ed1ab_0
          - tectonic=0.8.2=ha1425e2_0
          - tempest-remap=2.1.1=hfda0864_0
          - terminado=0.17.1=pyh41d4057_0
          - testpath=0.6.0=pyhd8ed1ab_0
          - texlive-core=20210325=h97429d4_1
          - tinycss2=1.2.1=pyhd8ed1ab_0
          - tk=8.6.12=h27826a3_0
          - tmux=3.3=h385fc29_0
          - toml=0.10.2=pyhd8ed1ab_0
          - tomli=2.0.1=pyhd8ed1ab_0
          - toolz=0.11.2=pyhd8ed1ab_0
          - tornado=6.3.2=py310h2372a71_0
          - tqdm=4.64.0=pyhd8ed1ab_0
          - traitlets=5.9.0=pyhd8ed1ab_0
          - typed-ast=1.5.3=py310h5764c6d_0
          - typing-extensions=4.2.0=hd8ed1ab_1
          - typing_extensions=4.2.0=pyha770c72_1
          - tzdata=2022a=h191b570_0
          - udunits2=2.2.28=hc3e0081_0
          - ujson=5.3.0=py310hd8f1fbe_0
          - ukkonen=1.0.1=py310hbf28c38_2
          - unicodedata2=14.0.0=py310h5764c6d_1
          - url-normalize=1.4.3=pyhd8ed1ab_0
          - urllib3=1.26.9=pyhd8ed1ab_0
          - vim=9.0.1425=py310pl5321he38944a_0
          - virtualenv=20.14.1=py310hff52083_0
          - wcwidth=0.2.5=pyh9f0ad1d_2
          - webencodings=0.5.1=py_1
          - webob=1.8.7=pyhd8ed1ab_0
          - websocket-client=1.3.2=pyhd8ed1ab_0
          - wget=1.20.3=ha35d2d1_1
          - wheel=0.37.1=pyhd8ed1ab_0
          - wrapt=1.14.1=py310h5764c6d_0
          - xarray=0.21.1=pyhd8ed1ab_0
          - xorg-fixesproto=5.0=h7f98852_1002
          - xorg-inputproto=2.3.2=h7f98852_1002
          - xorg-kbproto=1.0.7=h7f98852_1002
          - xorg-libice=1.0.10=h7f98852_0
          - xorg-libsm=1.2.3=hd9c2040_1000
          - xorg-libx11=1.8.4=h0b41bf4_0
          - xorg-libxau=1.0.9=h7f98852_0
          - xorg-libxdmcp=1.1.3=h7f98852_0
          - xorg-libxext=1.3.4=h7f98852_1
          - xorg-libxfixes=5.0.3=h7f98852_1004
          - xorg-libxi=1.7.10=h7f98852_0
          - xorg-libxpm=3.5.13=h7f98852_0
          - xorg-libxrender=0.9.10=h7f98852_1003
          - xorg-libxt=1.2.1=h7f98852_2
          - xorg-renderproto=0.11.1=h7f98852_1002
          - xorg-xextproto=7.3.0=h7f98852_1002
          - xorg-xproto=7.0.31=h7f98852_1007
          - xz=5.2.6=h166bdaf_0
          - y-py=0.5.9=py310h4426083_0
          - yaml=0.2.5=h7f98852_2
          - yaml-cpp=0.7.0=h27087fc_2
          - yapf=0.32.0=pyhd8ed1ab_0
          - yarl=1.7.2=py310h5764c6d_2
          - ypy-websocket=0.8.2=pyhd8ed1ab_0
          - zeromq=4.3.4=h9c3ff4c_1
          - zict=2.2.0=pyhd8ed1ab_0
          - zipp=3.8.0=pyhd8ed1ab_0
          - zlib=1.2.13=h166bdaf_4
          - zstd=1.5.2=ha95c52a_0
          - pip:
            - arrow==1.2.3
            - async-lru==2.0.2
            - cdo==1.5.2
            - cf-xarray==0.7.5
            - climopy==0.1.0.post285+dirty
            - flake8-unused-arguments==0.0.10
            - fqdn==1.5.1
            - greenlet==1.1.2
            - icecream==2.1.3
            - isoduration==20.11.0
            - jsonpointer==2.3
            - jupyter-contrib-core==0.3.3
            - jupyter-contrib-nbextensions==0.7.0
            - matplotlib-iterm2==0.1.0
            - mistune==0.8.4
            - nbclient==0.5.13
            - nbconvert==5.6.1
            - proplot==0.9.5.post341+dirty
            - pynvim==0.4.3
            - uri-template==1.2.0
            - webcolors==1.13
        prefix: /home/ldavis/miniconda3

@krassowski
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3.6.3

What about 4.0.0? Did the ToC refactor fix it, or can you still reproduce it with the latest version?

@lukelbd
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lukelbd commented May 27, 2023

I can try in a new environment. Busy right now but will revisit.

@lukelbd
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lukelbd commented May 27, 2023

(For now have downgraded from 4.0.0 due to bugs/current incompatibility with plugins.)

@lukelbd
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lukelbd commented May 27, 2023

Update: The bug seems to trigger after encountering a cell that raises an exception. Otherwise if I open a new notebook or refresh the window, the indicators update correctly. Also just to make things hard... it doesn't happen after every exception.

Here's a screenshot (state was frozen after the exception).

Screenshot 2023-05-27 at 15 09 27

@JasonWeill JasonWeill removed the status:Needs Triage Applied to new issues that need triage label May 30, 2023
@JasonWeill JasonWeill mentioned this issue May 30, 2023
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@tuncbkose
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I can consistently reproduce this by restarting the kernel when a cell like time.sleep(10) is running. In this case, it looks like packages/notebook/src/toc.ts::NotebookToCModel::onExecuted() doesn't get executed due to the kernel restart, so the heading statuses are not updated (by NotebookTocModel::updateRunningStatus).

A related buggy behavior is that when some heading indicators are frozen due to the above, executing a new cell in a heading below the frozen headings will result in the heading having a "scheduled" indicator instead of "executing".
Example.

I couldn't reproduce the bug by raising an exception.

On: Lab 4.0.0

@krassowski
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Sounds like we should listen to more kernel messages. Something similar was done for #13780 in #13832.

@skyetim skyetim mentioned this issue Jul 29, 2023
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@krassowski @lukelbd @tuncbkose @JasonWeill