DESCRIPTION

Package: dropestr
Type: Package
Title: Preprocessing of Droplet-Based Single-Cell RNA-Seq Data
Version: 0.8.0
Authors@R: c(
    person("Viktor", "Petukhov", email = "viktor.s.petuhov@ya.ru", role = c("aut")),
    person("Peter", "Kharchenko", email = "peter_kharchenko@hms.harvard.edu", role = "aut"), person("Evan","Biederstedt", email="evan.biederstedt@gmail.com", role=c("aut", "cre")))
Description: Correction of UMI sequence errors, UMI collisions and filtration
    of low-quality cells using the methods described in "dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments", Petukhov et al., Genome Biology (2018), <doi:10.1186/s13059-018-1449-6>.
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports:
  ks (>= 1.10.4),
  ggplot2 (>= 2.1.0),
  dplyr (>= 0.5),
  magrittr,
  pcaPP (>= 1.9),
  Rcpp,
  RcppProgress, 
  stats
Suggests:
  knitr,
  parallel,
  preseqR (>= 3.1.0),
  optparse,
  rmarkdown,
  testthat
Depends:
  R (>= 3.5.0),
  Matrix (>= 1.2-7.1)
RoxygenNote: 7.1.1
LinkingTo: 
  Rcpp,
  RcppProgress,
  RcppEigen
VignetteBuilder: knitr
SystemRequirements: GNU make, C++11
NeedsCompilation: yes
URL: https://github.com/kharchenkolab/dropestr
BugReports: https://github.com/kharchenkolab/dropestr/issues
Author: Viktor Petukhov [aut], Peter Kharchenko [aut], Evan Biederstedt [aut, cre]
Maintainer: Evan Biederstedt <evan.biederstedt@gmail.com>