diff --git a/README.md b/README.md index 5964de2..90d327a 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ # Racon -[![Latest GitHub release](https://img.shields.io/github/release/isovic/racon.svg)](https://github.com/isovic/racon/releases/latest) -[![Build status for gcc/clang](https://travis-ci.org/isovic/racon.svg?branch=master)](https://travis-ci.org/isovic/racon) +[![Latest GitHub release](https://img.shields.io/github/release/lbcb-sci/racon.svg)](https://github.com/lbcb-sci/racon/releases/latest) +[![Build status for gcc/clang](https://travis-ci.org/lbcb-sci/racon.svg?branch=master)](https://travis-ci.org/lbcb-sci/racon) [![Published in Genome Research](https://img.shields.io/badge/published%20in-Genome%20Research-blue.svg)](https://doi.org/10.1101/gr.214270.116) Consensus module for raw de novo DNA assembly of long uncorrected reads. @@ -30,7 +30,7 @@ A **wrapper script** is also available to enable easier usage to the end-user fo To install Racon run the following commands: ```bash -git clone --recursive https://github.com/isovic/racon.git racon +git clone --recursive https://github.com/lbcb-sci/racon.git racon cd racon mkdir build cd build @@ -51,7 +51,7 @@ To build the wrapper script add `-Dracon_build_wrapper=ON` while running `cmake` ### CUDA Support Racon makes use of [NVIDIA's ClaraGenomicsAnalysis SDK](https://github.com/clara-genomics/ClaraGenomicsAnalysis) for CUDA accelerated polishing and alignment. -To build `racon` with CUDA support, add `-Dracon_enable_cuda=ON` while running `cmake`. If CUDA support is unavailable, the `cmake` step will error out. +To build `racon` with CUDA support, add `-Dracon_enable_cuda=ON` while running `cmake`. If CUDA support is unavailable, the `cmake` step will error out. Note that the CUDA support flag does not produce a new binary target. Instead it augments the existing `racon` binary itself. ```bash diff --git a/src/main.cpp b/src/main.cpp index b4a6a2b..1ee85fc 100644 --- a/src/main.cpp +++ b/src/main.cpp @@ -12,7 +12,7 @@ #include "cuda/cudapolisher.hpp" #endif -static const char* version = "v1.4.3"; +static const char* version = "v1.4.4"; static const int32_t CUDAALIGNER_INPUT_CODE = 10000; static struct option options[] = { diff --git a/vendor/bioparser b/vendor/bioparser index 542271e..c093b14 160000 --- a/vendor/bioparser +++ b/vendor/bioparser @@ -1 +1 @@ -Subproject commit 542271e5c674476ccb0cc0f6341a3fd96117e172 +Subproject commit c093b14d53b71551bee44478cc01ddf83c5265d3