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Add article to dispersion doc
Update correlation and placement-factorization doc
Refine Placement-Factorization documentation
Minor fix in edgepca documentation
Update edge pca doc
Add unchunkify MSA option
Updated Citation and References (markdown)
Add Citation and References
Created Citation and References (markdown)
Refine heat-tree doc
Updated Phylogenetic Placement (markdown)
Add Newick tree output options
Extend tree output option information
Add pendant length filters
Add clean tree command
Add taxon cleaning option to taxonomy tree
Minor refinement in filefix option description
Refine output options and add merge command
Fix general usage image
Fix br nl
Update assign
Fix surplus br
Refine all option tables, and add filter
Updated General Usage (markdown)