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Related to #111
tseemann@trillian:mm2 $ cat seq.fa > ATGCATGCATGCATGC ATGCATGCATGCATGC ATGCATGCATGCATGC ATGCATGCATGCATGC ATGCATGCATGCATGC ATGCATGCATGCATGC ATGCATGCATGCATGC tseemann@trillian:mm2 $ minimap2 -d seq.fa.mmi seq.fa [M::mm_idx_gen::0.002*1.55] collected minimizers [M::mm_idx_gen::0.002*1.84] sorted minimizers [M::main::0.003*1.56] loaded/built the index for 1 target sequence(s) [M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 1 [M::mm_idx_stat::0.003*1.56] distinct minimizers: 1 (0.00% are singletons); average occurrences: 48.000; average spacing: 2.333 [M::main] Version: 2.13-r850 [M::main] CMD: minimap2 -d seq.fa.mmi seq.fa [M::main] Real time: 0.004 sec; CPU: 0.006 sec; Peak RSS: 0.003 GB tseemann@trillian:mm2 $ minimap2 seq.fa seq.fa 2> /dev/null | cut -f 1-10 112 1 112 + 112 1 112 111 112 2 112 - 112 2 112 110 112 1 109 - 112 1 109 108 112 5 112 + 112 1 108 107 112 1 108 + 112 5 112 107 112 1 105 - 112 1 105 104
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Related to #111
The text was updated successfully, but these errors were encountered: