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Large -K is not respected #2

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mrvollger opened this issue May 22, 2020 · 0 comments
Open

Large -K is not respected #2

mrvollger opened this issue May 22, 2020 · 0 comments

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@mrvollger
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Hi,

This is basically a duplicate/reminder of lh3/minimap2#491 but for yak. In short if -K is too large it only processes one sequence at a time.

Will process many at once:

 ./yak count -K 2000000000  mat_ill.fasta -o  /dev/null

Will only process one at a time:

 ./yak count -K 20000000000  mat_ill.fasta -o  /dev/null

Best,
Mitchell

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