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a question regarding the train edges setup #5

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Barristen opened this issue Jan 21, 2025 · 0 comments
Open

a question regarding the train edges setup #5

Barristen opened this issue Jan 21, 2025 · 0 comments

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@Barristen
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Hello Guofeng, thank you for your excellent work and contributions. I have a question regarding the setup. I noticed in the code here that the edge_index does not exclude validation and test edges. My understanding is that you assume PPI is already known and intend to further predict the specific categories of the 7 PPI types. If so, I personally think this is a reasonable practical requirement. However, I am unsure if PPI predictions generally follow this paradigm. Specifically, does this also apply to PIPR?
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@Barristen